RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NLRC3Q7RTR2 1065 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 OR52N1Q8NH53 320 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 SLC35A4Q96G79 324 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 DHRS9Q9BPW9 319 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 SLC6A20Q9NP91 592 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 EMC7Q9NPA0 242 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 GNG13Q9P2W3 67 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CA14Q9ULX7 337 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CCL27Q9Y4X3 112 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 A0A0D9SG52 128 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LALBAP00709 142 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 SLC2A1P11166 492 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CXCL3P19876 107 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CSNK1A1P48729 337 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 RAE1P78406 368 aaKnown RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 MEP1BQ16820 701 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CST9LP1Q5W188 147 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 TEX261Q6UWH6 196 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LRRC18Q8N456 261 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 SIRT6Q8N6T7 355 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 TMEM217Q8N7C4 229 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ATF6BQ99941 703 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 UBQLN4Q9NRR5 601 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 U3KQ87 197 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CACNA1GO43497 2377 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 RREB1Q92766 1687 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LRIT2A6NDA9 550 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 GPR171O14626 319 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 OR2T7P0C7T2 308 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 FPR3P25089 353 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 HTR2CP28335 458 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 TACR3P29371 465 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ZP2Q05996 745 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 KIR2DS3Q14952 304 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CST9Q5W186 159 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CMTM4Q8IZR5 234 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 VN1R2Q8NFZ6 395 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 OR2T27Q8NH04 317 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF296Q8WUU4 475 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CNRIP1Q96F85 164 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ABHD1Q96SE0 405 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LMF2Q9BU23 707 aaKnown RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 PAPOLGQ9BWT3 736 aaKnown RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 PTTG3PQ9NZH4 202 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CAMK2AQ9UQM7 478 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 EMC9Q9Y3B6 208 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 A0A1W2PPV4 95 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PLA2G10O15496 165 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SOD1P00441 154 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 BLVRBP30043 206 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 DAP3P51398 398 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 POLR2HP52434 150 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SLC7A9P82251 487 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 CAMK2DQ13557 499 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 LPAL2Q16609 132 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 Q499Y3 187 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 LIPNQ5VXI9 398 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 CD300LGQ6UXG3 332 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PXT1Q8NFP0 134 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 LRRC46Q96FV0 321 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 B4GALT7Q9UBV7 327 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 NEU3Q9UQ49 428 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 A6NIZ1 184 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SLC6A8P48029 635 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RAP1BP61224 184 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RAP1AP62834 184 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PLA2G7Q13093 441 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RPE65Q16518 533 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 H3F3CQ6NXT2 135 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SLC41A2Q96JW4 573 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 TMEM59Q9BXS4 323 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SFXN1Q9H9B4 322 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 DNMT3BQ9UBC3 853 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PIKFYVEQ9Y2I7 2098 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SDK2Q58EX2 2172 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 BRWD3Q6RI45 1802 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 A0A0J9YY10 115 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 NXPH3O95157 252 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 EDN3P14138 238 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 NPY4RP50391 375 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 MELKQ14680 651 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF79Q15937 498 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms