RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 DUX4L3P0CJ86 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L4P0CJ87 422 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L5P0CJ88 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L6P0CJ89 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L7P0CJ90 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 NUDT1P36639 197 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PAX9P55771 341 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLC8A3P57103 927 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 GUCY2DQ02846 1103 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RCAN2Q14206 197 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PSG3Q16557 428 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L9Q6RFH8 374 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 Q6ZPB1 254 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 TIPARPQ7Z3E1 657 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 FAM19A1Q7Z5A9 133 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CEP112Q8N8E3 955 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 OR1K1Q8NGR3 316 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ACMSDQ8TDX5 336 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PCNPQ8WW12 178 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 PSMG2Q969U7 264 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 APH1AQ96BI3 265 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MED30Q96HR3 178 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TGM7Q96PF1 710 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CCT8L2Q96SF2 557 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 NKX3-1Q99801 234 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLC29A1Q99808 456 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 UQCC2Q9BRT2 126 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PPA2Q9H2U2 334 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ZDHHC4Q9NPG8 344 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 B3GAT2Q9NPZ5 323 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 INPP5EQ9NRR6 644 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MS4A12Q9NXJ0 267 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A8Q9NY64 477 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4Q9UBX2 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PHF11Q9UIL8 331 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TFR2Q9UP52 801 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CSNK1G3Q9Y6M4 447 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 XIRP2A4UGR9 3374 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 SOCS2O14508 198 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 CYB561D2O14569 222 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 CHEK1O14757 476 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 BUB3O43684 328 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 ERLIN2O94905 339 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 VAMP5O95183 116 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 KLHL2O95198 593 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 VAPBO95292 243 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 OXSR1O95747 527 aaPredicted RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 GPIP06744 558 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 SP1P08047 785 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 H2AFZP0C0S5 128 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 FRMD6-AS1P0C7T7 363 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 PRKACAP17612 351 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 C4BPBP20851 252 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 OPRD1P41143 372 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 NUMBP49757 651 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 PGFP49763 221 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 FHITP49789 147 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 CKAP4Q07065 602 aaKnown RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 GPR176Q14439 515 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 WHAMMP3Q1A5X7 153 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 MICBQ29980 383 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 OR8G2PQ6IF36 304 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 TMEM53Q6P2H8 277 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 BTNL3Q6UXE8 466 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 H2AFVQ71UI9 128 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 UTS2BQ765I0 119 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 ZNF571Q7Z3V5 609 aaPredicted RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 SELENOHQ8IZQ5 122 aaKnown RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 RNF10Q8N5U6 811 aaKnown RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 LMO3Q8TAP4 145 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 SPRYD4Q8WW59 207 aaPredicted RBP2.15□□□□□ -2.06
MCF2-204ENST00000414978 ASZ1Q8WWH4 475 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 TNFRSF14Q92956 283 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 ASB9Q96DX5 294 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 TCEAL4Q96EI5 215 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 PKIBQ9C010 78 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 ACTR6Q9GZN1 396 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 RAB1BQ9H0U4 201 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 AGPAT4Q9NRZ5 378 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 ELOVL2Q9NXB9 296 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 MMP24Q9Y5R2 645 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 SAR1BQ9Y6B6 198 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 STYXL1Q9Y6J8 313 aa2.15□□□□□ -2.06
MCF2-204ENST00000414978 LOC105371242A0A075B767 164 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 C9JVG2 144 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CLDN5O00501 218 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 SURF4O15260 269 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 TRAPPC3O43617 180 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 LMX1BO60663 402 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RBMXL2O75526 392 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 DFFBO76075 338 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 HLA-DRAP01903 254 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 TNNC2P02585 160 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CELA2AP08217 269 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 MGMTP16455 207 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ATP6V1B2P21281 511 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 UQCRFS1P47985 274 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PSMD4P55036 377 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 PAX5Q02548 391 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ATXN7L3Q14CW9 347 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms