RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ARPC4-TTLL3A0A0A6YYG9 625 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SGCEO43556 437 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 FCMRO60667 390 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 S100A6P06703 90 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 AKIRIN2Q53H80 203 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 CPNE4Q96A23 557 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 OR2M2Q96R28 347 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SLC25A18Q9H1K4 315 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 CALHM2Q9HA72 323 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 FGF20Q9NP95 211 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 STEAP1Q9UHE8 339 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SOCS6O14544 535 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 IFI6P09912 130 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 IL9P15248 144 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 DLX5P56178 289 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 RAE1P78406 368 aaKnown RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 RAB31Q13636 194 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 UBQLN2Q9UHD9 624 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF225Q9UK10 706 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 IGHV3-20A0A0C4DH32 117 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 F5H0A9 414 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF81P51508 661 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 Q6ZPB1 254 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 BEND4Q6ZU67 534 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 TMPRSS11FQ6ZWK6 438 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 FOXRED2Q8IWF2 684 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 OR6V1Q8N148 313 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 PLPP5Q8NEB5 264 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 GDF15Q99988 308 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 GLTPQ9NZD2 209 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 DOCK5Q9H7D0 1870 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 hCG_1809904A0A1W2PP81 198 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PPE2 198 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PR64 198 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PRV1 198 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ARGFXA6NJG6 315 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 IL2RAP01589 272 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 LAP3P28838 519 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 S100A7P31151 101 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SPOCK1Q08629 439 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 GPNMBQ14956 572 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ARSJQ5FYB0 599 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 BOLLQ8N9W6 283 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 POGLUT1Q8NBL1 392 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF419Q96HQ0 510 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 TECTBQ96PL2 329 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 KCNJ15Q99712 375 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 CMSS1Q9BQ75 279 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SYNPO2LQ9H987 977 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 A0A087WUJ7 227 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 XRCC2O43543 280 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 GPR137BO60478 399 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 TPOP07202 933 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF44P15621 663 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SPI1P17947 270 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 NOVA1P51513 510 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ACKR1Q16570 336 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 EGFL6Q8IUX8 553 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 D2HGDHQ8N465 521 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 OR56B4Q8NH76 319 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 PFN4Q8NHR9 129 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 BOD1Q96IK1 185 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 MRPS28Q9Y2Q9 187 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PPH5 198 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 PIP5K1CO60331 668 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SERPINA7P05543 415 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 FBXO45P0C2W1 286 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 AKR1C4P17516 323 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 MAKP20794 623 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 CATR1Q13166 79 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 P2RY14Q15391 338 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 MSMO1Q15800 293 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SFRP4Q6FHJ7 346 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 ADGRE4PQ86SQ3 457 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 SULF2Q8IWU5 870 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 OR4M1Q8NGD0 313 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 LRRC20Q8TCA0 184 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 MED20Q9H944 212 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 UNKLQ9H9P5 680 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 PRSS37A4D1T9 235 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 TDRD15B5MCY1 1934 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 OR2J2O76002 312 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 AKR7A3O95154 331 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 PPIAP62937 165 aaKnown RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 CD300LDQ6UXZ3 194 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 IL17RDQ8NFM7 739 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 TCEAL2Q9H3H9 227 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 RDH8Q9NYR8 311 aa10.92□□□□□ -0.66
PTPRF-205ENST00000414879 VSX1Q9NZR4 365 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-205ENST00000414879 LOC100289279A0A1B0GTE1 492 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms