RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 BBIP1A8MTZ0 92 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 M0QX08 132 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NME4O00746 187 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SNX3O60493 162 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 TPST2O60704 377 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CCDC22O60826 627 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SS18L1O75177 396 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 MFN2O95140 757 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NXPH3O95157 252 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 IGHV3-9P01782 118 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 FCGR2AP12318 317 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 POU2F1P14859 743 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ETS2P15036 469 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NCK1P16333 377 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 IGFBP2P18065 325 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CCKARP32238 428 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 PCGF2P35227 344 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 APOBEC1P41238 236 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 MAGEA8P43361 318 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RPS5P46782 204 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 GZMMP51124 257 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SLC7A2P52569 658 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CRYBA2P53672 197 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NCALDP61601 193 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SLC25A3Q00325 362 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RASGEF1BQ0VAM2 473 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ALKBH1Q13686 389 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 CEACAM7Q14002 265 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 GUSBP1Q15486 140 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 OR7A5Q15622 319 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NPTX1Q15818 432 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 DUSP7Q16829 419 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 LRRC23Q53EV4 343 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 AP1ARQ63HQ0 302 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 TMPPEQ6ZT21 453 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NET1Q7Z628 596 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 PXKQ7Z7A4 578 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 TMEM200AQ86VY9 491 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CALHM3Q86XJ0 350 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZNF440Q8IYI8 595 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RNF148Q8N7C7 305 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 GPR32P1Q8NGA4 272 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 OR52E4Q8NGH9 312 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 OR4D11Q8NGI4 311 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RP9Q8TA86 221 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 SLC26A7Q8TE54 656 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RNF128Q8TEB7 428 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 OIT3Q8WWZ8 545 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 NRGNQ92686 78 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RNASE6Q93091 150 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 CPNE4Q96A23 557 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 SLC25A36Q96CQ1 311 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 DDIT4LQ96D03 193 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 GMPPAQ96IJ6 420 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZNF583Q96ND8 569 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZFP3Q96NJ6 502 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZNF607Q96SK3 696 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ECSITQ9BQ95 431 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 PSD2Q9BQI7 771 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZNF559Q9BR84 538 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 AIFM2Q9BRQ8 373 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 KLHL4Q9C0H6 718 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ZCCHC4Q9H5U6 513 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 TIGARQ9NQ88 270 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 PCDHB16Q9NRJ7 776 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 GID8Q9NWU2 228 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ADPRHL2Q9NX46 363 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CMTM6Q9NX76 183 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 KLHL28Q9NXS3 571 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 RPS6KB2Q9UBS0 482 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 SEC14L4Q9UDX3 406 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 TESQ9UGI8 421 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 SPIN1Q9Y657 262 aaPredicted RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 VPS13CQ709C8 3753 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 ANKHD1Q8IWZ3 2542 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 PRR14LQ5THK1 2151 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 TUBAL3A6NHL2 446 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ZNF716A6NP11 495 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 A8MXE2 369 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 FAM220BPB1ANY3 271 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 TEX22C9J3V5 150 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 LRRN3E7EW58 273 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 FAAHO00519 579 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 KPNA4O00629 521 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 SLC22A2O15244 555 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CYTIPO60759 359 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 SERPINB7O75635 380 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 AKR7A3O95154 331 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 PMS2P2O95744 297 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 CGAP01215 116 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
VPS41-205ENST00000414632 DUSP1P28562 367 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 IDUAP35475 653 aa4.3□□□□□ -1.72
VPS41-205ENST00000414632 ARL3P36405 182 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms