RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TXNL4BQ9NX01 149 aaKnown RBP11.84□□□□□ -0.51
LITAF-203ENST00000413364 ATXN7L1Q9ULK2 861 aaPredicted RBP11.84□□□□□ -0.51
LITAF-203ENST00000413364 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
LITAF-203ENST00000413364 SF3B6Q9Y3B4 125 aaKnown RBP11.84□□□□□ -0.51
LITAF-203ENST00000413364 NPTNQ9Y639 398 aa11.84□□□□□ -0.51
LITAF-203ENST00000413364 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 FRG2CA6NGY1 282 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 RIIAD1A6NNX1 92 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 PRR23D1E9PI22 279 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 PRR23D2P0DMB1 279 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 SULT1A3P0DMM9 295 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 SULT1A4P0DMN0 295 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 PEPDP12955 493 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 SLC6A6P31641 620 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 ADH7P40394 386 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 ACSM1Q08AH1 577 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 RBMS3Q6XE24 437 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 FGD2Q7Z6J4 655 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 SIRT6Q8N6T7 355 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 SLC2A12Q8TD20 617 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 ZNF721Q8TF20 911 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 HCAR1Q9BXC0 346 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 NXF5Q9H1B4 397 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 A0A087WUJ7 227 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 A0A1B0GX78 115 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 PPP1R3DO95685 299 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 APEX1P27695 318 aaKnown RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 GABRA5P31644 462 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 PLA1AQ53H76 456 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 OR51G2Q8NGK0 314 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 OR4C6Q8NH72 309 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 OR1S1Q8NH92 325 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 C2CD4CQ8TF44 421 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 KISS1RQ969F8 398 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 TMEM203Q969S6 136 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
LITAF-203ENST00000413364 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 NUDT22Q9BRQ3 303 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 FGF21Q9NSA1 209 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 GHRLQ9UBU3 117 aa11.83□□□□□ -0.52
LITAF-203ENST00000413364 TMEM238LA0A1B0GVL6 79 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 L7N2F9 121 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 GPR171O14626 319 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 UTS2O95399 124 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 FOLR2P14207 255 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 EFNA3P52797 238 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 GUCA2BQ16661 112 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 ZNF791Q3KP31 576 aaPredicted RBP11.82□□□□□ -0.52
LITAF-203ENST00000413364 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 ARHGAP11AQ6P4F7 1023 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 ZNF322Q6U7Q0 402 aaPredicted RBP11.82□□□□□ -0.52
LITAF-203ENST00000413364 ACBD7Q8N6N7 88 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 OR2T35Q8NGX2 323 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 ADIPOR1Q96A54 375 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 C3orf49Q96BT1 292 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 VRK1Q99986 396 aaPredicted RBP11.82□□□□□ -0.52
LITAF-203ENST00000413364 MRTO4Q9UKD2 239 aaKnown RBP11.82□□□□□ -0.52
LITAF-203ENST00000413364 PLEKHA6Q9Y2H5 1048 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 YARS2Q9Y2Z4 477 aaKnown RBP11.82□□□□□ -0.52
LITAF-203ENST00000413364 NUBP2Q9Y5Y2 271 aa11.82□□□□□ -0.52
LITAF-203ENST00000413364 CCDC163A0A0D9SF12 145 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 ZC3H12DA2A288 527 aaKnown RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 SLC22A31A6NKX4 558 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 RP2O75695 350 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CRTAPO75718 401 aaPredicted RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 IFNGP01579 166 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CRYBA1P05813 215 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CXCL3P19876 107 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 DHPSP49366 369 aaPredicted RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 RAG2P55895 527 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 DCAF7P61962 342 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CD226Q15762 336 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 VWA2Q5GFL6 755 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 C1orf189Q5VU69 101 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 C22orf42Q6IC83 251 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CD200R1LQ6Q8B3 271 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 B3GLCTQ6Y288 498 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 DPPA2Q7Z7J5 298 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 GATSQ8NAP1 163 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 OR14A16Q8NHC5 309 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 SPRYD4Q8WW59 207 aaPredicted RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 C1GALT1C1Q96EU7 318 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 CCNL2Q96S94 520 aaPredicted RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 NUDT9Q9BW91 350 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 NCOR1P1Q9H4R4 102 aa11.81□□□□□ -0.52
LITAF-203ENST00000413364 EXOSC3Q9NQT5 275 aaKnown RBP11.81□□□□□ -0.52
LITAF-203ENST00000413364 ZFP57Q9NU63 452 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms