RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CTXN3Q4LDR2 81 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 NKAPLQ5M9Q1 402 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 HENMT1Q5T8I9 393 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 ZNF549Q6P9A3 640 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MSRB3Q8IXL7 192 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ZNF567Q8N184 647 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FBXO39Q8N4B4 442 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ZNF610Q8N9Z0 462 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR1K1Q8NGR3 316 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ASB17Q8WXJ9 295 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 EDEM1Q92611 657 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 BCL2L2Q92843 193 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 FAM46BQ96A09 425 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SLC35E1Q96K37 410 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 IP6K3Q96PC2 410 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 INSM2Q96T92 566 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 OMDQ99983 421 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PORCNQ9H237 461 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 NOX3Q9HBY0 568 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 HMX1Q9NP08 348 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 GPR83Q9NYM4 423 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TAS2R16Q9NYV7 291 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RPS6KB2Q9UBS0 482 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RNF115Q9Y4L5 304 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 KCNE1BA0A087WTH5 132 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 C7orf77A4D0Y5 90 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 DHRS7CA6NNS2 312 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CTDSPLO15194 276 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SIVA1O15304 175 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TSPAN13O95857 204 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 IGHA2P01877 340 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SFTA3P0C7M3 94 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 UROSP10746 265 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GTF2F2P13984 249 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MTHFD2P13995 350 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SDHBP21912 280 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PSMB4P28070 264 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ARRB1P49407 418 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 INPP1P49441 399 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ST8SIA6P61647 398 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RPS8P62241 208 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 NFATC4Q14934 902 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SLC36A2Q495M3 483 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RAB6CQ53S08 254 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PSAPL1Q6NUJ1 521 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OAFQ86UD1 273 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ZNF100Q8IYN0 542 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 D2HGDHQ8N465 521 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SIDT2Q8NBJ9 832 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 HJURPQ8NCD3 748 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR4K14Q8NGD5 310 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR9A4Q8NGU2 314 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR56B4Q8NH76 319 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PSMG2Q969U7 264 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FAM162AQ96A26 154 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TMEM45BQ96B21 275 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 KCTD12Q96CX2 325 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 RNFT2Q96EX2 444 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 IL17FQ96PD4 163 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 ULBP1Q9BZM6 244 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SPATC1LQ9H0A9 340 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RAB6CQ9H0N0 254 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MTG2Q9H4K7 406 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 Q9N2J8 555 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SLC2A8Q9NY64 477 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FNDC3AQ9Y2H6 1198 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 DSPPQ9NZW4 1301 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 ESR1P03372 595 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 LCATP04180 440 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FABP3P05413 133 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CST2P09228 141 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CD37P11049 281 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CD1DP15813 335 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 BPIP17213 487 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MPLP40238 635 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GLRBP48167 497 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MMP16P51512 607 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 DIO3P55073 304 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FABP5Q01469 135 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PAX5Q02548 391 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GPR18Q14330 331 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TSNQ15631 228 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PIM3Q86V86 326 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 UBALD2Q8IYN6 164 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GABRG1Q8N1C3 465 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR2Z1Q8NG97 314 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 STT3BQ8TCJ2 826 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RXFP2Q8WXD0 754 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 JSRP1Q96MG2 331 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 ST3GAL6Q9Y274 331 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FAM96BQ9Y3D0 163 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RALGAPA2Q2PPJ7 1873 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms