RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 F5H0A9 414 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 G3V2L1 256 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 H0YL77 283 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 IFNL4K9M1U5 179 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 M0R082 166 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 HMGN4O00479 90 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RNASET2O00584 256 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TNFRSF13BO14836 293 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MGRN1O60291 552 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF500O60304 480 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SHOX2O60902 331 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 FZD7O75084 574 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PEX11AO75192 247 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TSPAN9O75954 239 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 KRT34O76011 436 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MFN2O95140 757 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CPSF4O95639 269 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 LIPFP07098 398 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SFTPBP07988 381 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CD55P08174 381 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 FGF4P08620 206 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PATE4P0C8F1 98 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 GKN3PP0CG01 181 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 NR2F1P10589 423 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 G6PDP11413 515 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCL2P13500 99 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 HLA-DOBP13765 273 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CPA3P15088 417 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 NQO1P15559 274 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RPS2P15880 293 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RPS4Y1P22090 263 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCNOP22674 350 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 UQCRC2P22695 453 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TNFSF4P23510 183 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 AHCYP23526 432 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 APLNRP35414 380 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CHI3L1P36222 383 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TGFBR2P37173 567 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MDH2P40926 338 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ACAA2P42765 397 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 IER3P46695 156 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCT5P48643 541 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CSNK1A1P48729 337 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLDN8P56748 225 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 FGF12P61328 243 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 GNB2P62879 340 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TXNL4AP83876 142 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TNFAIP6P98066 277 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PAX2Q02962 417 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 EGR4Q05215 589 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 EGR3Q06889 387 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 C2orf54Q08AI8 447 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 FUT5Q11128 374 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAD2L1Q13257 205 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PTGR1Q14914 329 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 HERPUD1Q15011 391 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZMYND11Q15326 602 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PGS1Q32NB8 556 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF718Q3SXZ3 478 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCDC153Q494R4 210 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC36A2Q495M3 483 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 NRN1LQ496H8 165 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 LIN52Q52LA3 116 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PDCD4Q53EL6 469 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 KLHL22Q53GT1 634 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OXLD1Q5BKU9 147 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 XKR7Q5GH72 579 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 DEFB121Q5J5C9 76 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 COX20Q5RI15 118 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 C6orf136Q5SQH8 315 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 THEM4Q5T1C6 240 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MRPL2Q5T653 305 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANXA8L1Q5VT79 327 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 IL23RQ5VWK5 629 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MBNL2Q5VZF2 373 aaKnown RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 DHRS7BQ6IAN0 325 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4F3Q6IEY1 312 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 C11orf87Q6NUJ2 197 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC27A4Q6P1M0 643 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM53Q6P2H8 277 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 C11orf88Q6PI97 169 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 C5orf46Q6UWT4 87 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 LRRC74BQ6ZQY2 392 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZCCHC23Q6ZST2 131 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 Q6ZSV7 163 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 VASH1Q7L8A9 365 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 NLRC3Q7RTR2 1065 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC16A14Q7RTX9 510 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZER1Q7Z7L7 766 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 LSRQ86X29 649 aaPredicted RBP1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 PTOV1Q86YD1 416 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 KLBQ86Z14 1044 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF584Q8IVC4 421 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SKA3Q8IX90 412 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 RIMKLAQ8IXN7 391 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLECL1Q8IZS7 167 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLEC4FQ8N1N0 589 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 MIER2Q8N344 545 aa1.98□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC22A24Q8N4F4 322 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms