RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 IL11P20809 199 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 PCBP3P57721 371 aaKnown RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 FUT5Q11128 374 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 MALLQ13021 153 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 E2F2Q14209 437 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 DPY19L2P2Q6ZN68 376 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FCRLAQ7L513 359 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 CMIPQ8IY22 773 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 IFT46Q9NQC8 304 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 PRMT8Q9NR22 394 aaPredicted RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 BABAM2Q9NXR7 383 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FASNP49327 2511 aaKnown RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 FAM90A27PA6NNH2 459 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 CLDN25C9JDP6 229 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 LYZL6O75951 148 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 CLEC2LP0C7M8 214 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FGF5P12034 268 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR3A3P47888 321 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR3A2P47893 321 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 RPS25P62851 125 aaKnown RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 CEACAM16Q2WEN9 425 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 ARIH2OSQ8N7S6 290 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR52I1Q8NGK6 324 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR14A2Q96R54 314 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 PAPOLGQ9BWT3 736 aaKnown RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 OBP2BQ9NPH6 170 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FANCFQ9NPI8 374 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 SLC22A13Q9Y226 551 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 A0A0B4J2E0 115 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 A0A1B0GX12 115 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR5H15A6NDH6 313 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 SLC22A20A6NK97 555 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 ZNF587BE7ETH6 402 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 SLC22A1O15245 554 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 HTR3BO95264 441 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 TGFBR2P37173 567 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 ETV1P50549 477 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 CEP78Q5JTW2 689 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 ZNF367Q7RTV3 350 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 GPALPP1Q8IXQ4 340 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 EXD3Q8N9H8 876 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FDCSPQ8NFU4 85 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 OR4C15Q8NGM1 316 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 FAM173AQ9BQD7 235 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 PRO3102Q9H379 93 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 TMEFF2Q9UIK5 374 aaPredicted RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 SCN8AQ9UQD0 1980 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 GBF1Q92538 1859 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 EIF1BO60739 113 aaKnown RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 GCM2O75603 506 aaPredicted RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 GP1BAP07359 652 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 PNLIPP16233 465 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 SPI1P17947 270 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 FABP6P51161 128 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 EMP3P54852 163 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ACTA2P62736 377 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ACTG2P63267 376 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TUBA3CQ13748 450 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TSC22D1Q15714 1073 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 LIPNQ5VXI9 398 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 SLX4IPQ5VYV7 408 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TUBA3EQ6PEY2 450 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF615Q8N8J6 731 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 DNAAF1Q8NEP3 725 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 IL17RDQ8NFM7 739 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 OR5T2Q8NGG2 359 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 SPTSSAQ969W0 71 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TMEM106AQ96A25 262 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 CENPOQ9BU64 300 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 C1orf198Q9H425 327 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 MMP25Q9NPA2 562 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 DNAJB11Q9UBS4 358 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 FZR1Q9UM11 496 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 A0A1W2PQL4 384 aaPredicted RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 PSKH1P11801 424 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 SHC1P29353 583 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 MAML2Q8IZL2 1156 aaPredicted RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 OR9K2Q8NGE7 335 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 OR8D4Q8NGM9 314 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 PIGTQ969N2 578 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 GPR87Q9BY21 358 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 DIABLOQ9NR28 239 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 UFSP2Q9NUQ7 469 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 PARPBPQ9NWS1 579 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF222Q9UK12 451 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TSC22D4Q9Y3Q8 395 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 KIF26AQ9ULI4 1882 aaPredicted RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 COL6A3P12111 3177 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 B4E171 279 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 CTDSP2O14595 271 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
SNX13-202ENST00000409604 TSPAN7P41732 249 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 TGM4P49221 684 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 RAB40BQ12829 278 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF74Q16587 644 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms