RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 B3GALT5Q9Y2C3 310 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 A0A0G2JK05 382 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 LINC00854A0A1B0GVQ3 168 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 ZNF879B4DU55 563 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 MASP2O00187 686 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 ZFPL1O95159 310 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 ABHD16AO95870 558 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 HSF1Q00613 529 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 SCN1BQ07699 218 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 ALKBH1Q13686 389 aaKnown RBP18.59■□□□□ 0.57
USP39-203ENST00000409470 YIF1BQ5BJH7 314 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 SLC35D2Q76EJ3 337 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 RNF166Q96A37 237 aaPredicted RBP18.59■□□□□ 0.57
USP39-203ENST00000409470 CDX4O14627 284 aaPredicted RBP18.59■□□□□ 0.57
USP39-203ENST00000409470 SPARCP09486 303 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 CSF3P09919 207 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 APEX1P27695 318 aaKnown RBP18.59■□□□□ 0.57
USP39-203ENST00000409470 THBS2P35442 1172 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 ADAM8P78325 824 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 FOXK1P85037 733 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 TAB1Q15750 504 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 SLC25A35Q3KQZ1 300 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 UNQ9370/PRO34162Q6UXP9 181 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 LRRC69Q6ZNQ3 347 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 PLCZ1Q86YW0 608 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 OR5AK2Q8NH90 309 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 CT55Q8WUE5 264 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 PHYHIPQ92561 330 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 NSMAFQ92636 917 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 NOX4Q9NPH5 578 aa18.59■□□□□ 0.57
USP39-203ENST00000409470 PSKH1P11801 424 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 ELK1P19419 428 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 EIF1P41567 113 aaKnown RBP18.58■□□□□ 0.56
USP39-203ENST00000409470 GLO1Q04760 184 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 CCBE1Q6UXH8 406 aaPredicted RBP18.58■□□□□ 0.56
USP39-203ENST00000409470 TRILQ7L0X0 811 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 TIPARPQ7Z3E1 657 aaKnown RBP18.58■□□□□ 0.56
USP39-203ENST00000409470 PPP1R32Q7Z5V6 425 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 SYT9Q86SS6 491 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 CADM3Q8N126 398 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 FRMD6Q96NE9 622 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 OR5B2Q96R09 309 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 SOSTQ9BQB4 213 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 MRPL22Q9NWU5 206 aaKnown RBP18.58■□□□□ 0.56
USP39-203ENST00000409470 HPF1Q9NWY4 346 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 MED29Q9NX70 200 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 SLCO1C1Q9NYB5 712 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 FRRS1LQ9P0K9 344 aa18.58■□□□□ 0.56
USP39-203ENST00000409470 COA3Q9Y2R0 106 aaPredicted RBP18.58■□□□□ 0.56
USP39-203ENST00000409470 CFAP54Q96N23 3096 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 CCL3P10147 92 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 SLC2A2P11168 524 aaPredicted RBP18.57■□□□□ 0.56
USP39-203ENST00000409470 MLF1P58340 268 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 C19orf57Q0VDD7 668 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 SLC18B1Q6NT16 456 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 DNM1P34Q6PK57 102 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 DND1Q8IYX4 353 aaKnown RBP18.57■□□□□ 0.56
USP39-203ENST00000409470 SAMD12Q8N8I0 201 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 ASB17Q8WXJ9 295 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 AMELYQ99218 206 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 PPP1R3EQ9H7J1 279 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 EXTL2Q9UBQ6 330 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 A0A1W2PNR3 127 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 A0A1W2PQ72 361 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 NPIPB13A6NJU9 1138 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 ACOD1A6NK06 481 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 NOTOA8MTQ0 251 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 NPIPB4C9JG80 1138 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 PTBP1P26599 531 aaKnown RBP eCLIP18.57■□□□□ 0.56
USP39-203ENST00000409470 OR2B6P58173 313 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 SELENBP1Q13228 472 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 P2RY14Q15391 338 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 FAM205BPQ63HN1 556 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 SLC22A10Q63ZE4 541 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 TMEM81Q6P7N7 255 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 LRRC28Q86X40 367 aaPredicted RBP18.57■□□□□ 0.56
USP39-203ENST00000409470 TRMT10AQ8TBZ6 339 aaKnown RBP18.57■□□□□ 0.56
USP39-203ENST00000409470 ZBTB8AQ96BR9 441 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 TXNDC15Q96J42 360 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 MAP6Q96JE9 813 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 NEURL2Q9BR09 285 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 DDA1Q9BW61 102 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 ANGPTL4Q9BY76 406 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 B3GAT2Q9NPZ5 323 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 TEKT2Q9UIF3 430 aa18.57■□□□□ 0.56
USP39-203ENST00000409470 AK6Q9Y3D8 172 aaKnown RBP18.57■□□□□ 0.56
USP39-203ENST00000409470 A0A0C4DFX4 3053 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 CENPBD1B2RD01 187 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 SSX4O60224 188 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 SRMP19623 302 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 ADH6P28332 368 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 SFTPDP35247 375 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 TALDO1P37837 337 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 MEP1BQ16820 701 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 LRRN1Q6UXK5 716 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 Q8N402 240 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 SLC25A43Q8WUT9 341 aaPredicted RBP18.56■□□□□ 0.56
USP39-203ENST00000409470 RGP1Q92546 391 aaPredicted RBP18.56■□□□□ 0.56
USP39-203ENST00000409470 FARSAQ9Y285 508 aaKnown RBP18.56■□□□□ 0.56
USP39-203ENST00000409470 RPH3AQ9Y2J0 694 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms