RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FXYD6P3P58550 94 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 PPP1R8Q12972 351 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 TSPAN31Q12999 210 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 MICAQ29983 383 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 SMARCD3Q6STE5 483 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 TMEM108Q6UXF1 575 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 THSD4Q6ZMP0 1018 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF813Q6ZN06 617 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 OR9Q2Q8NGE9 314 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 NRGNQ92686 78 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 HDAC2Q92769 488 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 NMD3Q96D46 503 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 FOXB1Q99853 325 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 ALG12Q9BV10 488 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 C1QTNF6Q9BXI9 259 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 SMURF2Q9HAU4 748 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 MOV10Q9HCE1 1003 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 NRIP3Q9NQ35 241 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 RNF115Q9Y4L5 304 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 FKBP6O75344 327 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 SEC14L2O76054 403 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 CD3EP07766 207 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 PTAFRP25105 342 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF133P52736 654 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 GPR139Q6DWJ6 353 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 DPY19L2P2Q6ZN68 376 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF704Q6ZNC4 412 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 FAM122BQ7Z309 247 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 FNDC8Q8TC99 324 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 SLCO4A1Q96BD0 722 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 EDARQ9UNE0 448 aa17.34■□□□□ 0.37
PDLIM2-207ENST00000409417 CIB2O75838 187 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 GASTP01350 101 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 B4GALT1P15291 398 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 CD40P25942 277 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 CD47Q08722 323 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 RFX4Q33E94 735 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 THEM4Q5T1C6 240 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 C10orf128Q5T292 105 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 CDH24Q86UP0 819 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 FAM169BQ8N8A8 192 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 FANK1Q8TC84 345 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 RBP7Q96R05 134 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 OR52D1Q9H346 318 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 LIME1Q9H400 295 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 TMEM38BQ9NVV0 291 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 IL20RAQ9UHF4 553 aa17.33■□□□□ 0.37
PDLIM2-207ENST00000409417 MYO9AB2RTY4 2548 aa17.33■□□□□ 0.36
PDLIM2-207ENST00000409417 M0R1B8 84 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 XKRYO14609 159 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 GNGT2O14610 69 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 ENTPD5O75356 428 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 PLAUP00749 431 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 APEHP13798 732 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 TUBA1BP68363 451 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 TUBA4AP68366 448 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 MYBPC1Q00872 1141 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 NRN1LQ496H8 165 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF620Q6ZNG0 422 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 TUBA1AQ71U36 451 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 AQP11Q8NBQ7 271 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 UTP4Q969X6 686 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 RADILQ96JH8 1075 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 Q96M85 177 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF570Q96NI8 536 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 MGAT4BQ9UQ53 548 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 PLCE1Q9P212 2302 aa17.32■□□□□ 0.36
PDLIM2-207ENST00000409417 ABCD4O14678 606 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ARHGEF9O43307 516 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 AHCYL1O43865 530 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 TXNDC12O95881 172 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 OR8G3PP0DMU2 310 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 SDHAP31040 664 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC6A6P31641 620 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF84P51523 738 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ADAM5Q6NVV9 412 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC22A24Q8N4F4 322 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CLDN22Q8N7P3 220 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 DGCR6LQ9BY27 220 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CRNNQ9UBG3 495 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 DNAJB9Q9UBS3 223 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ST6GALNAC2Q9UJ37 374 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 IER3IP1Q9Y5U9 82 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ARRDC5A6NEK1 342 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 ARPC3O15145 178 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC2A10O95528 541 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CBR1P16152 277 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CAPZA2P47755 286 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 RPS6KA3P51812 740 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 IST1P53990 364 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 FMODQ06828 376 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CCNIQ14094 377 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 C3orf36Q3SXR2 165 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 MESTQ5EB52 335 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 RPL13AP3Q6NVV1 102 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 PAMR1Q6UXH9 720 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 OR10G2Q8NGC3 310 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 GIPC3Q8TF64 312 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC38A2Q96QD8 506 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms