RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 USE1Q9NZ43 259 aa18.28■□□□□ 0.52
C4orf48-201ENST00000409248 REV1Q9UBZ9 1251 aa18.28■□□□□ 0.52
C4orf48-201ENST00000409248 ORC6Q9Y5N6 252 aa18.28■□□□□ 0.52
C4orf48-201ENST00000409248 ANKRD17O75179 2603 aaKnown RBP18.28■□□□□ 0.52
C4orf48-201ENST00000409248 TEX15Q9BXT5 2789 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 SLC35F4A4IF30 521 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 ZNF587BE7ETH6 402 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 SLC43A1O75387 559 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 RAD51DO75771 328 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 MPGP29372 298 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 SELENOPP49908 381 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 ALDH3A2P51648 485 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 SLC34A1Q06495 639 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 RIPK1Q13546 671 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 TAB1Q15750 504 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 CLEC12AQ5QGZ9 265 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 GPR139Q6DWJ6 353 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 C22orf34Q6ZV56 151 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 ASB10Q8WXI3 467 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 TSPAN32Q96QS1 320 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 OR2M2Q96R28 347 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 EMC6Q9BV81 110 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 TSSK6Q9BXA6 273 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 PLA2G12AQ9BZM1 189 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 GRHPRQ9UBQ7 328 aa18.27■□□□□ 0.52
C4orf48-201ENST00000409248 ZNF346Q9UL40 294 aaKnown RBP18.27■□□□□ 0.52
C4orf48-201ENST00000409248 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 A6NIZ1 184 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 OR5H1A6NKK0 313 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 SIAH2O43255 324 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ZNF432O94892 652 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 PPP1R3DO95685 299 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 IGHG1P01857 330 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 TP53P04637 393 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ITGA5P08648 1049 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 APEHP13798 732 aaKnown RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 POU1F1P28069 291 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 HOXC12P31275 282 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 RAP1BP61224 184 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 RAP1AP62834 184 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 PPA1Q15181 289 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 CARD17Q5XLA6 110 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 C17orf78Q8N4C9 275 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 OR2T33Q8NG76 320 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 OR8D4Q8NGM9 314 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 MAGEE2Q8TD90 523 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 SLC25A44Q96H78 314 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ZNF570Q96NI8 536 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ALKBH3Q96Q83 286 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 LINC00470Q9BZP3 86 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 C8orf4Q9NR00 106 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 NKX1-2Q9UD57 310 aaPredicted RBP18.26■□□□□ 0.51
C4orf48-201ENST00000409248 BAIAP2Q9UQB8 552 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ADAM18Q9Y3Q7 739 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 IER3IP1Q9Y5U9 82 aa18.26■□□□□ 0.51
C4orf48-201ENST00000409248 ABCA4P78363 2273 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 SOCS2O14508 198 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 XKRYO14609 159 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 IMPA2O14732 288 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 MITFO75030 526 aaPredicted RBP18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ALPLP05186 524 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 IGFBP1P08833 259 aaPredicted RBP18.25■□□□□ 0.51
C4orf48-201ENST00000409248 CDH2P19022 906 aaPredicted RBP18.25■□□□□ 0.51
C4orf48-201ENST00000409248 NOS3P29474 1203 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 SDHAP31040 664 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ACVR1BP36896 505 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ESRRGP62508 458 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 CAMK2DQ13557 499 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ARMC4Q5T2S8 1044 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 C1QTNF12Q5T7M4 302 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ALKBH2Q6NS38 261 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 FAM122BQ7Z309 247 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 TMEM123Q8N131 208 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ARIH2OSQ8N7S6 290 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ZNF566Q969W8 418 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 ERMAPQ96PL5 475 aaPredicted RBP18.25■□□□□ 0.51
C4orf48-201ENST00000409248 TMEFF2Q9UIK5 374 aaPredicted RBP18.25■□□□□ 0.51
C4orf48-201ENST00000409248 LRBAP50851 2863 aa18.25■□□□□ 0.51
C4orf48-201ENST00000409248 TEX13CA0A0J9YWL9 993 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 CENPBD1B2RD01 187 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 CASQ2O14958 399 aaPredicted RBP18.24■□□□□ 0.51
C4orf48-201ENST00000409248 ARPC3O15145 178 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 IDH3BO43837 385 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 ATP6V1G2O95670 118 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 ACADSP16219 412 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 PEX2P28328 305 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 CSNK1A1P48729 337 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 CRISP1P54107 249 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 RAD23AP54725 363 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 SH3BGRP55822 239 aaPredicted RBP18.24■□□□□ 0.51
C4orf48-201ENST00000409248 CLRN1P58418 232 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 KRR1Q13601 381 aaKnown RBP18.24■□□□□ 0.51
C4orf48-201ENST00000409248 C9orf135Q5VTT2 229 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 LPCAT4Q643R3 524 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 KLHL24Q6TFL4 600 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 C20orf196Q8IYI0 205 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 GPR137CQ8N3F9 429 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 OR6N1Q8NGY5 312 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 ZNF519Q8TB69 540 aa18.24■□□□□ 0.51
C4orf48-201ENST00000409248 PLPPR2Q96GM1 343 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms