RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SDR9C7Q8NEX9 313 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 OR2T4Q8NH00 348 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 METTL21AQ8WXB1 218 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 SMIM19Q96E16 107 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 HCAR1Q9BXC0 346 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NMNAT2Q9BZQ4 307 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NXF5Q9H1B4 397 aaKnown RBP11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 GRHPRQ9UBQ7 328 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 PCDHGA9Q9Y5G4 932 aaKnown RBP11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 TRAV36DV7A0A075B6V5 113 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 TRBV2A0A0J9YWF9 115 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ANKUB1A6NFN9 424 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 HMX3A6NHT5 357 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 A8MUA0 341 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 BLOC1S5-TXNDC5H3BN57 136 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 LRRTM2O43300 516 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 TSPAN2O60636 221 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 HPGDSO60760 199 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ALOX12BO75342 701 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 CCNKO75909 580 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 CYC1P08574 325 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 EDNRAP25101 427 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 AZGP1P25311 298 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 MAPK3P27361 379 aaPredicted RBP11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 MAP2K3P46734 347 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 GDI2P50395 445 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 EFNA3P52797 238 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 RAB25P57735 213 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 OR12D2P58182 307 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 CTXN1P60606 82 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 NNATQ16517 81 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 VASNQ6EMK4 673 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 PYHIN1Q6K0P9 492 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 LEG1Q6P5S2 330 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 NRARPQ7Z6K4 114 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 RDH10Q8IZV5 341 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 SCAIQ8N9R8 606 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 Q8NA96 180 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 OR6S1Q8NH40 331 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 TMEM234Q8WY98 164 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 GHSRQ92847 366 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ZMYND19Q96E35 227 aaPredicted RBP11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 FRMD6Q96NE9 622 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 GAL3ST4Q96RP7 486 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 SLITRK2Q9H156 845 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 MMP25Q9NPA2 562 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 RPRD1BQ9NQG5 326 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 CYSLTR2Q9NS75 346 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ASF1BQ9NVP2 202 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF221Q9UK13 617 aa11.64□□□□□ -0.55
SMARCB1-203ENST00000407082 ZC3H12DA2A288 527 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 CENPXA8MT69 81 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 NOTOA8MTQ0 251 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 GNB5O14775 395 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 OR2T1O43869 369 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ADAM11O75078 769 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ITGA10O75578 1167 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SC5DO75845 299 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ASAH2BP0C7U1 165 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SPNP16150 400 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 NPR2P20594 1047 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 APEX1P27695 318 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SHC1P29353 583 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 P2RX1P51575 399 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 NR0B1P51843 470 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 POLR2HP52434 150 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ERVK-25P63136 954 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 MFSD13AQ14CX5 517 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 EBPQ15125 230 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 YIF1BQ5BJH7 314 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ZMAT1Q5H9K5 638 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 RSBN1Q5VWQ0 802 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 FCRLBQ6BAA4 426 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SFXN4Q6P4A7 337 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 STK35Q8TDR2 534 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 C15orf40Q8WUR7 153 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 TSLPQ969D9 159 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SNRNP40Q96DI7 357 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ADAD1Q96M93 576 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ADOQ96SZ5 270 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 DDOQ99489 341 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 TIMP4Q99727 224 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 MESP1Q9BRJ9 268 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ALG12Q9BV10 488 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 NUDT9Q9BW91 350 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 WWTR1Q9GZV5 400 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 RNF32Q9H0A6 362 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 RNF121Q9H920 327 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 RBFOX1Q9NWB1 397 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 EXTL2Q9UBQ6 330 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 HS3ST3B1Q9Y662 390 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
SMARCB1-203ENST00000407082 SPENQ96T58 3664 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms