RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PRODH2Q9UF12 536 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 PCDHGA9Q9Y5G4 932 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 GABARAPH6UMI1 98 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CCSO14618 274 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 GPRIN2O60269 458 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CD3DP04234 171 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 AMY2AP04746 511 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ADRA2CP18825 462 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 PSMD4P55036 377 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 UBXN2BQ14CS0 331 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 TAF13Q15543 124 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 FAM199XQ6PEV8 388 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 C3P1Q6ZMU1 363 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 EMC6Q9BV81 110 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 B3GNT2Q9NY97 397 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CKLFQ9UBR5 152 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CACNA1EQ15878 2313 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ECDO95905 644 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ZNF823P16415 610 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 S1PR1P21453 382 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 BLKP51451 505 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ZP1P60852 638 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 FZD2Q14332 565 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ZNF74Q16587 644 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CARD17Q5XLA6 110 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 ZNF248Q8NDW4 579 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 GABRG3Q99928 467 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 NTMQ9P121 344 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
PPP4R1-202ENST00000400555 KIF26AQ9ULI4 1882 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 EFCAB7A8K855 629 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 PRSS3P35030 304 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 GLYATL3Q5SZD4 288 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 TMEM205Q6UW68 189 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 TSTD1Q8NFU3 115 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 MMP25Q9NPA2 562 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 ELF5Q9UKW6 265 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 FOXJ3Q9UPW0 622 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 EMC9Q9Y3B6 208 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 A6NCN8 305 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 OR5K4A6NMS3 321 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 CD2P06729 351 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 TPOP07202 933 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 PRKXP51817 358 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 ARFIP1P53367 373 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 SLC16A9Q7RTY1 509 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 DND1Q8IYX4 353 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 OR4C16Q8NGL9 310 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 CTHRC1Q96CG8 243 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 GFI1Q99684 422 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 LRRC61Q9BV99 259 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 POMT2Q9UKY4 750 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 NOP16Q9Y3C1 178 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 ZDBF2Q9HCK1 2354 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 MEIKINA0A087WXM9 373 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 TNFRSF10CO14798 259 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 MAPK3P27361 379 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 RORAP35398 523 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 PUDPQ08623 228 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 ZNF595Q8IYB9 648 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 NAXEQ8NCW5 288 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 SLC25A44Q96H78 314 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 TSPAN32Q96QS1 320 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 SERTAD3Q9UJW9 196 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 FBXO4Q9UKT5 387 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 CA14Q9ULX7 337 aa11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 SPTBN5Q9NRC6 3674 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-202ENST00000400555 GALP22466 123 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 NFYAP23511 347 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 SDHAP31040 664 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 CSNK1EP49674 416 aaKnown RBP11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 RAB11BQ15907 218 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 ACKR1Q16570 336 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 C2orf76Q3KRA6 126 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 KLHL26Q53HC5 615 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 MESP1Q9BRJ9 268 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 RTN4RQ9BZR6 473 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 HAO2Q9NYQ3 351 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 COPS7AQ9UBW8 275 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 B9D1Q9UPM9 204 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 SPTY2D1-AS1A0A0U1RR47 76 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 C13orf42A0A1B0GVH6 325 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 H0YIG0 161 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 WISP1O95388 367 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 SLC2A1P11166 492 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 OR1D5P58170 312 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 YPEL5P62699 121 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 RIN1Q13671 783 aa11.48□□□□□ -0.57
PPP4R1-202ENST00000400555 COL28A1Q2UY09 1125 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms