RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ANKDD1AQ495B1 522 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 VHLLQ6RSH7 139 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 DPPA2Q7Z7J5 298 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF525Q8N782 197 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 MAPK1IP1LQ8NDC0 245 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 BPIFA2Q96DR5 249 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 KCTD14Q9BQ13 255 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 FFAR1O14842 300 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 PIP5K1CO60331 668 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 PRSS23O95084 383 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 FARS2O95363 451 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 SERPINA1P01009 418 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 QDPRP09417 244 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 NR2C1P13056 603 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 IFI30P13284 250 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF35P13682 527 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 ACADSP16219 412 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 NR4A1P22736 598 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 THBS4P35443 961 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 GIPRP48546 466 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 PTDSS1P48651 473 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 PIGFQ07326 219 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 LOXL1Q08397 574 aaPredicted RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 SNTB2Q13425 540 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 MOSPD2Q8NHP6 518 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 C10orf105Q8TEF2 133 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 FAM168AQ92567 244 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 HTRA1Q92743 480 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 MCHR2Q969V1 340 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 HSH2DQ96JZ2 352 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 FNDC11Q9BVV2 318 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 FAM107BQ9H098 131 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 TXNIPQ9H3M7 391 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 SPAG4Q9NPE6 437 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 RPS6KA6Q9UK32 745 aa12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-203ENST00000399299 GMNCA6NCL1 334 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 J3KTA2 159 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 NDUFS8O00217 210 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 TLX2O43763 284 aaPredicted RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 TRMUO75648 421 aaKnown RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 IGHMP01871 453 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 TP53P04637 393 aaPredicted RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 SERPINA5P05154 406 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 YAP1P46937 504 aaKnown RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF84P51523 738 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 PRKCDQ05655 676 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 ALG10Q5BKT4 473 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 FKBP9P1Q75LS8 142 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 NRMQ8IXM6 262 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 ACOT11Q8WXI4 607 aaPredicted RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 FAM162AQ96A26 154 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 NMD3Q96D46 503 aaKnown RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 DOK1Q99704 481 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
SMIM11A-203ENST00000399299 A0A087WUU8 490 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 TMEM129A0AVI4 362 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 CD5LO43866 347 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 SAGP10523 405 aaPredicted RBP12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 MAKP20794 623 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 FUT4P22083 530 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 PCSK6P29122 969 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 GLRXP35754 106 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 SLC9A3P48764 834 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 EVX1P49640 407 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 PDLIM4P50479 330 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 RAB39AQ14964 217 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 FAM205BPQ63HN1 556 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 MBOAT2Q6ZWT7 520 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 CYP4Z1Q86W10 505 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF584Q8IVC4 421 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 FAM156AQ8NDB6 213 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 OR4K5Q8NGD3 323 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 FGFBP3Q8TAT2 258 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms