RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR4E1P0C645 316 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TYRP1P17643 537 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SPI1P17947 270 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 AVPR2P30518 371 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 CCKBRP32239 447 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PRSS3P35030 304 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 POU3F4P49335 361 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ATP1B3P54709 279 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 HFEQ30201 348 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3GQ6DHY5 549 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2L13Q8N349 312 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2L3Q8NG85 312 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR4S1Q8NGB4 309 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6N2Q8NGY6 317 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OR8D1Q8WZ84 308 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 FGF13Q92913 245 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SMARCD2Q92925 531 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PLEKHA1Q9HB21 404 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF304Q9HCX3 659 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 RASL12Q9NYN1 266 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM82A0PJX8 343 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ALOX12BO75342 701 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB3DO95716 219 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 HLA-DQA2P01906 255 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 DBIP07108 87 aaKnown RBP8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB40ALP0C0E4 278 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 VIPR2P41587 438 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MEOX2P50222 304 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 DEFB103AP81534 67 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 SCRN3Q0VDG4 424 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 DUSP8Q13202 625 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ARHGAP19Q14CB8 494 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 ARHGAP11BQ3KRB8 267 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 OLFML2AQ68BL7 652 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TMPRSS11FQ6ZWK6 438 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PPP1R1CQ8WVI7 109 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB40AQ8WXH6 277 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 PLPPR2Q96GM1 343 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 MYADMQ96S97 322 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 TLNRD1Q9H1K6 362 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 STARD5Q9NSY2 213 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 DPP7Q9UHL4 492 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 COL4A3Q01955 1670 aa8.99□□□□□ -0.97
PTCHD4-202ENST00000398738 DOCK9Q9BZ29 2069 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RFPL4AA6NLU0 287 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RFPL4AL1F8VTS6 287 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 H7C417 338 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 NDUFB2O95178 105 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 HLA-AP01891 365 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 CRYBA1P05813 215 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 GP1BAP07359 652 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 DCNP07585 359 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 AKAIN1P0CW23 69 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 CST5P28325 142 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 CAPZA2P47755 286 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SNRPEP62304 92 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 NOGQ13253 232 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SNTB1Q13884 538 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 DHCR24Q15392 516 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RBMS3Q6XE24 437 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC35D2Q76EJ3 337 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB11FIP2Q7L804 512 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 DPY19L4Q7Z388 723 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RNF113BQ8IZP6 322 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SPAG16Q8N0X2 631 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 GALNT16Q8N428 558 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 ALG12Q9BV10 488 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 LMAN2LQ9H0V9 348 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC25A32Q9H2D1 315 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 RXFP3Q9NSD7 469 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 FRRS1LQ9P0K9 344 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 MTFP1Q9UDX5 166 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SNRNP200O75643 2136 aaKnown RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 TRPM6Q9BX84 2022 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 TRBV23-1A0A0A0MS06 115 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 A0A0B4J2A0 478 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 C5orf51A6NDU8 294 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 GGT3PA6NGU5 568 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2T1O43869 369 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 MGMTP16455 207 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 CD34P28906 385 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 NPBWR1P48145 328 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 HOXA1P49639 335 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 DIO1P49895 249 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 PDZK1IP1Q13113 114 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 PLEKHN1Q494U1 663 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 PRAMEF8Q5VWM4 474 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 PRAMEF7Q5VXH5 474 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF227Q86WZ6 799 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 GTPBP8Q8N3Z3 284 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 OR14A16Q8NHC5 309 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 GPBAR1Q8TDU6 330 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 TMED6Q8WW62 240 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 LINC00615Q96LM1 132 aaPredicted RBP8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 HRH4Q9H3N8 390 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms