RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ZNF83P51522 516 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 CLRN1P58418 232 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 ACTR3P61158 418 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 OR7E24Q6IFN5 339 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 ANKRD16Q6P6B7 361 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 PTCHD4Q6ZW05 846 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 ABHD12BQ7Z5M8 362 aaPredicted RBP13.79□□□□□ -0.2
MBD1-207ENST00000398488 AMIGO2Q86SJ2 522 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 TMEM200AQ86VY9 491 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 CDC20BQ86Y33 519 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 GIPC3Q8TF64 312 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 PYDC1Q8WXC3 89 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 LRTOMTQ8WZ04 291 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 PLPPR2Q96GM1 343 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 KRCC1Q9NPI7 259 aaPredicted RBP13.79□□□□□ -0.2
MBD1-207ENST00000398488 ZNF224Q9NZL3 707 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 PDP1Q9P0J1 537 aaPredicted RBP13.79□□□□□ -0.2
MBD1-207ENST00000398488 UGT2A1Q9Y4X1 527 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 LRBAP50851 2863 aa13.79□□□□□ -0.2
MBD1-207ENST00000398488 CSMD1Q96PZ7 3565 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 ANKRD65E5RJM6 399 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 H3BNX3 289 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 ARHGEF9O43307 516 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 B4GALT1P15291 398 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 IFNGR2P38484 337 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 ZNF133P52736 654 aaPredicted RBP13.78□□□□□ -0.2
MBD1-207ENST00000398488 TGFBR3Q03167 851 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 SLC25A47Q6Q0C1 308 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 KLHL17Q6TDP4 642 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 DPY19L2P2Q6ZN68 376 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
MBD1-207ENST00000398488 MYPOPQ86VE0 399 aaPredicted RBP13.78□□□□□ -0.2
MBD1-207ENST00000398488 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 DGCR6LQ9BY27 220 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 CLEC4MQ9H2X3 399 aaPredicted RBP13.78□□□□□ -0.2
MBD1-207ENST00000398488 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
MBD1-207ENST00000398488 SOCS2O14508 198 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 SOX14O95416 240 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 SCG5P05408 212 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 PATE4P0C8F1 98 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 CDAP32320 146 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 CDKN2AP42771 156 aaKnown RBP13.77□□□□□ -0.21
MBD1-207ENST00000398488 SPOCK1Q08629 439 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 TAF11Q15544 211 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 ETFDHQ16134 617 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 CLEC12AQ5QGZ9 265 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 NCMAPQ5T1S8 102 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 ZNF813Q6ZN06 617 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 RASSF6Q6ZTQ3 369 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 ZNF627Q7L945 461 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 LINC00471Q8N535 108 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
MBD1-207ENST00000398488 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
MBD1-207ENST00000398488 NSMAFQ92636 917 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 NEUROG1Q92886 237 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 LURAP1Q96LR2 239 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 FOXB1Q99853 325 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 PLEKHF2Q9H8W4 249 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 B3GAT2Q9NPZ5 323 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 MGAT4BQ9UQ53 548 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 POFUT2Q9Y2G5 429 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 CDH10Q9Y6N8 788 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 CADP27708 2225 aa13.77□□□□□ -0.21
MBD1-207ENST00000398488 SLC22A23A1A5C7 686 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 TXNDC12O95881 172 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 HLA-HP01893 362 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 CELA3BP08861 270 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 SDHAP31040 664 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
MBD1-207ENST00000398488 GABPB1Q06547 395 aaPredicted RBP13.76□□□□□ -0.21
MBD1-207ENST00000398488 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 CD47Q08722 323 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 KRR1Q13601 381 aaKnown RBP13.76□□□□□ -0.21
MBD1-207ENST00000398488 BEX5Q5H9J7 111 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 C10orf128Q5T292 105 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 OTPQ5XKR4 325 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 SKA3Q8IX90 412 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
MBD1-207ENST00000398488 USB1Q9BQ65 265 aaKnown RBP13.76□□□□□ -0.21
MBD1-207ENST00000398488 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 ALG12Q9BV10 488 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 IFT27Q9BW83 186 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 IL20Q9NYY1 176 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 NOTCH2Q04721 2471 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 AKAP6Q13023 2319 aa13.76□□□□□ -0.21
MBD1-207ENST00000398488 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
MBD1-207ENST00000398488 CENPBD1B2RD01 187 aa13.75□□□□□ -0.21
MBD1-207ENST00000398488 BHLHE40O14503 412 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms