RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ZDHHC11BP0C7U3 371 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 MGMTP16455 207 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 SLC2A5P22732 501 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 OMGP23515 440 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 AK4P27144 223 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 NAA10P41227 235 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 PRRX1P54821 245 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 RPS21P63220 83 aaKnown RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 GBE1Q04446 702 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 AQP6Q13520 282 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 CHRNA6Q15825 494 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 COA6Q5JTJ3 125 aaKnown RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 SPANXN2Q5MJ10 180 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 ZNF621Q6ZSS3 439 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 ASCL5Q7RTU5 278 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 RNF175Q8N4F7 328 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 FANK1Q8TC84 345 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 SLC22A8Q8TCC7 542 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 LKAAEAR1Q8TD35 194 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 RDH5Q92781 318 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 MCUR1Q96AQ8 359 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 SGK3Q96BR1 496 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 ASB9Q96DX5 294 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 DUS3LQ96G46 650 aaKnown RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 RNF185Q96GF1 192 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 ATP5SQ99766 215 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 RARRES2Q99969 163 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 CENPKQ9BS16 269 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 OSBPL10Q9BXB5 764 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 DNTTIP1Q9H147 329 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 LINC00597Q9H2U6 94 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 EXO5Q9H790 373 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 TMEM185BQ9H7F4 350 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 TMEM165Q9HC07 324 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 FGF20Q9NP95 211 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 DMAP1Q9NPF5 467 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 ZNF226Q9NYT6 803 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 STOX2Q9P2F5 926 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 SHPKQ9UHJ6 478 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 NUFIP1Q9UHK0 495 aaKnown RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 TRAPPC4Q9Y296 219 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 PRG3Q9Y2Y8 225 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 F11RQ9Y624 299 aaKnown RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 CACNG2Q9Y698 323 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 GTF3C1Q12789 2109 aa1.78□□□□□ -2.13
CD47-203ENST00000398258 PDS5BQ9NTI5 1447 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 CEMIPQ8WUJ3 1361 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 A0A075B6Q4 140 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 TRBV9A0A0B4J1U6 114 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 PLAC8L1A1L4L8 177 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 H3BNH8 94 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 NDUFAB1O14561 156 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 XKRYO14609 159 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RAB29O14966 203 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 CLOCKO15516 846 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 EEDO75530 441 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 FGGP02679 453 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 FTH1P02794 183 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 BGLAPP02818 100 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 PCCAP05165 728 aaPredicted RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 TOP1P11387 765 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 FOLR1P15328 257 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 GALP22466 123 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 SERPINB5P36952 375 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RFX3P48380 749 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RAB9AP51151 201 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RAB10P61026 200 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ADARB1P78563 741 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 PAX5Q02548 391 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 TGM3Q08188 693 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 GUCA2BQ16661 112 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RFX4Q33E94 735 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 HSDL1Q3SXM5 330 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 LY6G6FQ5SQ64 297 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ZNF530Q6P9A1 599 aaPredicted RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 CNIH2Q6PI25 160 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ZNF836Q6ZNA1 936 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 CCDC73Q6ZRK6 1079 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 BZW1Q7L1Q6 419 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 C6orf120Q7Z4R8 191 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ZNF429Q86V71 674 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 THOC6Q86W42 341 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 MMAAQ8IVH4 418 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 IQCKQ8N0W5 287 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 PDIK1LQ8N165 341 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 STPG2Q8N412 459 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 HSD17B11Q8NBQ5 300 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 MDS2Q8NDY4 140 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 OR10R2Q8NGX6 335 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 RHEBL1Q8TAI7 183 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ACER1Q8TDN7 264 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 CD300LFQ8TDQ1 290 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 GIMAP1Q8WWP7 306 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 SRSF12Q8WXF0 261 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 PIK3IP1Q96FE7 263 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 WFIKKN1Q96NZ8 548 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 TSSK3Q96PN8 268 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 ANKRA2Q9H9E1 313 aa1.77□□□□□ -2.13
CD47-203ENST00000398258 LSM7Q9UK45 103 aaKnown RBP1.77□□□□□ -2.13
CD47-203ENST00000398258 ING4Q9UNL4 249 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms