RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SLX1AQ9BQ83 275 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 CRB3Q9BUF7 120 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 WWTR1Q9GZV5 400 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 EPHA6Q9UF33 1036 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 VPS13AQ96RL7 3174 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 FXYD6-FXYD2A0A087WZ82 144 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 KDM4BO94953 1096 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 IFNGR1P15260 489 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 MAPK3P27361 379 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 HLA-DMAP28067 261 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 RIDAP52758 137 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 AP3S2P59780 193 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 PSMA6P60900 246 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 RAB14P61106 215 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 EGR4Q05215 589 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 CAMK2DQ13557 499 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 ATXN7L3Q14CW9 347 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 EBPQ15125 230 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 UBE2NLQ5JXB2 153 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAM199XQ6PEV8 388 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 CMIPQ8IY22 773 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 ARL5BQ96KC2 179 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 SPACA5Q96QH8 159 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 NOX3Q9HBY0 568 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 AKAP7Q9P0M2 348 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 EP300Q09472 2414 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 A0A1B0GX78 115 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 A0A1W2PNR3 127 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 UBE2QL1A1L167 161 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 J3QRE1 110 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 GPRIN2O60269 458 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC6A1P30531 599 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 THBS2P35442 1172 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 AFF3P51826 1226 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 EMP2P54851 167 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 RPS15P62841 145 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 PLA2G7Q13093 441 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 INPP5JQ15735 1006 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 TMEM225Q6GV28 225 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 PAPD4Q6PIY7 484 aaKnown RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR52B4Q8NGK2 314 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR13C3Q8NGS6 347 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 NPRL2Q8WTW4 380 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 ADAMTS14Q8WXS8 1223 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC25A44Q96H78 314 aaPredicted RBP9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 CAMK2AQ9UQM7 478 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 TMEM14AQ9Y6G1 99 aa9.45□□□□□ -0.9
CPSF1P1-201ENST00000397477 SPTBN2O15020 2390 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 TRAV36DV7A0A075B6V5 113 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ARPC3O15145 178 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 TRIM3O75382 744 aaPredicted RBP9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 SCRG1O75711 98 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ALDOBP05062 364 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 H2BFMP0C1H6 154 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 CTLA4P16410 223 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 RAD52P43351 418 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 CXCL12P48061 93 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ARSKQ6UWY0 536 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 EXO5Q9H790 373 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ANKRD10Q9NXR5 420 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR5V1Q9UGF6 321 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 A0A0G2JK05 382 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 GDF9O60383 454 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ALOX12BO75342 701 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 F10P00742 488 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 HPXP02790 462 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 POU3F4P49335 361 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ST3GAL2Q16842 350 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 YIF1BQ5BJH7 314 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 KCTD18Q6PI47 426 aaPredicted RBP9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 KLHL24Q6TFL4 600 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 EID2Q8N6I1 236 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR7G1Q8NGA0 311 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 PMM1Q92871 262 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 HYLS1Q96M11 299 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR5B2Q96R09 309 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC23A1Q9UHI7 598 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 LILRA5A6NI73 299 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 AIPO00170 330 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 P2RY10O00398 339 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 GUCA1AP43080 201 aaPredicted RBP9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF41P51814 821 aaPredicted RBP9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 GPLD1P80108 840 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 WDR38Q5JTN6 314 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAM69AQ5T7M9 428 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 DCXRQ7Z4W1 244 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ACBD4Q8NC06 268 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 DUSP18Q8NEJ0 188 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 GPER1Q99527 375 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms