RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NTF4P34130 210 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 PTGS2P35354 604 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 GABARAPL2P60520 117 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 SLC35A2P78381 396 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 CAMK2DQ13557 499 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 APOFQ13790 326 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 TMEM123Q8N131 208 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 ZNRF4Q8WWF5 429 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 SGCDQ92629 289 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 GGHQ92820 318 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 TSSK2Q96PF2 358 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 OR2M2Q96R28 347 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 PRRG4Q9BZD6 226 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 OR51V1Q9H2C8 321 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 DUSP21Q9H596 190 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 RNF122Q9H9V4 155 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 ASB6Q9NWX5 421 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 SCN3BQ9NY72 215 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 H2AFY2Q9P0M6 372 aaPredicted RBP15.02■□□□□ -0
TSPAN4-205ENST00000397406 BLOC1S6Q9UL45 172 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.02■□□□□ -02e-6■■■■□ 23.8
TSPAN4-205ENST00000397406 SLC5A6Q9Y289 635 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 TPRKBQ9Y3C4 175 aa15.02■□□□□ -0
TSPAN4-205ENST00000397406 RPL36Q9Y3U8 105 aaKnown RBP15.02■□□□□ -0
TSPAN4-205ENST00000397406 SNTNA6NMZ2 147 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 AHRRA9YTQ3 701 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 M0R3G1 203 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 EDN3P14138 238 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 RNPS1Q15287 305 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 ACSF3Q4G176 576 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 OR6V1Q8N148 313 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 SYT14Q8NB59 555 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 ZNF540Q8NDQ6 660 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 NOXO1Q8NFA2 376 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 TMEM45BQ96B21 275 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 ZNF775Q96BV0 537 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 NMD3Q96D46 503 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 TEAD3Q99594 435 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 ALG12Q9BV10 488 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 NUAK2Q9H093 628 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 BCO1Q9HAY6 547 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 MRPS18AQ9NVS2 196 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 CNOT2Q9NZN8 540 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 OSGIN2Q9Y236 505 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 RCE1Q9Y256 329 aa15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 SPTBN1Q01082 2364 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-205ENST00000397406 SLC22A31A6NKX4 558 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 ZNF726A6NNF4 738 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 ZNF724A8MTY0 619 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 CENPBD1B2RD01 187 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 PTGES3LE9PB15 166 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 GPR171O14626 319 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 IGHG1P01857 330 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 HTR1AP08908 422 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 PIPP12273 146 aaPredicted RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 FCGR2AP12318 317 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 MTNR1AP48039 350 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 CDH15P55291 814 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 TMED1Q13445 227 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 HIST3H3Q16695 136 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 KLHL12Q53G59 568 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 SLC35D3Q5M8T2 416 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 LINC01590Q5TEZ4 76 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 B3GLCTQ6Y288 498 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 ZBTB46Q86UZ6 589 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 OR2T4Q8NH00 348 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 IPCEF1Q8WWN9 437 aaPredicted RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 SIGLEC11Q96RL6 698 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 TRIB1Q96RU8 372 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 SRA1Q9HD15 236 aaKnown RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 FKBP7Q9Y680 259 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 ZGRF1Q86YA3 2104 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 IGLV1-36A0A0B4J1U3 117 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 EFCAB10A6NFE3 127 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 AKAP8O43823 692 aaKnown RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 SMIM18P0DKX4 95 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 CTLA4P16410 223 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 GSTT1P30711 240 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 PYCR1P32322 319 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 SELENOPP49908 381 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 CLRN1P58418 232 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 FMODQ06828 376 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 GTF2IRD2BQ6EKJ0 949 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 ZNF585AQ6P3V2 769 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 AHSA2Q719I0 299 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 GTF2IRD2Q86UP8 949 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 TUSC5Q8IXB3 177 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 OR51L1Q8NGJ5 315 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 FAM57AQ8TBR7 257 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 TMEM54Q969K7 222 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 RNFT2Q96EX2 444 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 COPS4Q9BT78 406 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 CALHM2Q9HA72 323 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 GP6Q9HCN6 339 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 HAO2Q9NYQ3 351 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 EMC3Q9P0I2 261 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 FOXD3Q9UJU5 478 aaPredicted RBP15□□□□□ -0.01
TSPAN4-205ENST00000397406 B9D1Q9UPM9 204 aa15□□□□□ -0.01
TSPAN4-205ENST00000397406 MOKQ9UQ07 419 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms