RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TMEM72A0PK05 275 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF716A6NP11 495 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 E7EQL1 145 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 H0YAE9 185 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ABCD4O14678 606 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF208O43345 1280 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 AHSA1O95433 338 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 SAGP10523 405 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 OSMP13725 252 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 COX5AP20674 150 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 IDUAP35475 653 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 GPR4P46093 362 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ESRRGP62508 458 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 PPA1Q15181 289 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ZIK1Q3SY52 487 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 TTC23Q5W5X9 447 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 RPL13AP3Q6NVV1 102 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 C3orf33Q6P1S2 294 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 KLHL17Q6TDP4 642 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 B3GLCTQ6Y288 498 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 SLC43A2Q8N370 569 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF433Q8N7K0 673 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 SPATA3Q8NHX4 192 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 SLC25A43Q8WUT9 341 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 CYGBQ8WWM9 190 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 TRMT61AQ96FX7 289 aaKnown RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ARL5BQ96KC2 179 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 ADI1Q9BV57 179 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 TOR3AQ9H497 397 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 MEPEQ9NQ76 525 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 C20orf141Q9NUB4 165 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 TMEFF2Q9UIK5 374 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-202ENST00000396828 LRRC42Q9Y546 428 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 IGKV1D-42A0A075B6H8 117 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 UNC119BA6NIH7 251 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 H3BN98 237 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 OR2T1O43869 369 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 SSX4O60224 188 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 MITFO75030 526 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-202ENST00000396828 RAD51DO75771 328 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 MT-ATP6P00846 226 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 HIST1H2ABP04908 130 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 TFPIP10646 304 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 ACADSP16219 412 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 CAPGP40121 348 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 RPS5P46782 204 aaKnown RBP9.06□□□□□ -0.96
NEDD8-202ENST00000396828 GSSP48637 474 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 SLC9A3P48764 834 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 CLK1P49759 484 aaKnown RBP9.06□□□□□ -0.96
NEDD8-202ENST00000396828 CDH11P55287 796 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD8-202ENST00000396828 NPRL3Q12980 569 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 TIMM23BQ5SRD1 257 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 C6orf52Q5T4I8 152 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 C1orf140Q5VVS0 124 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 ABLIM2Q6H8Q1 611 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 TMPPEQ6ZT21 453 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 RASSF6Q6ZTQ3 369 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 HIST3H2AQ7L7L0 130 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 OAFQ86UD1 273 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 DTX2Q86UW9 622 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 OR6S1Q8NH40 331 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 OR52N5Q8NH56 324 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 TEX47Q8TBZ9 253 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 HIST1H2ACQ93077 130 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 TEX12Q9BXU0 123 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 GABARAPL3Q9BY60 117 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 NDEL1Q9GZM8 345 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 NGBQ9NPG2 151 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 YAE1D1Q9NRH1 226 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 FAM118AQ9NWS6 357 aa9.06□□□□□ -0.96
NEDD8-202ENST00000396828 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 LOC100130705A0A1B0GUX0 176 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 OR5H1A6NKK0 313 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 SULT2B1O00204 365 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 DLGAP1O14490 977 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 CD5LO43866 347 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 OR7A10O76100 309 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 CH25HO95992 272 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 FUT1P19526 365 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 MAKP20794 623 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 POU1F1P28069 291 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 GTF2E2P29084 291 aaKnown RBP9.05□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF83P51522 516 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 RPS6KA3P51812 740 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 CRISP1P54107 249 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 EGR4Q05215 589 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 IL18R1Q13478 541 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 MED21Q13503 144 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 MFSD13AQ14CX5 517 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 ETFDHQ16134 617 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 ZNF74Q16587 644 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 ANKDD1AQ495B1 522 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 SLC36A3Q495N2 470 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 ZBED5Q49AG3 693 aa9.05□□□□□ -0.96
NEDD8-202ENST00000396828 SYT14P1Q58G82 188 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms