RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MRPL22Q9NWU5 206 aaKnown RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 PRR32B1ATL7 298 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 K7ENP7 123 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 MYL12BO14950 172 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF432O94892 652 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 GPANK1O95872 356 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 IGHG3P01860 377 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 CD36P16671 472 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 PCSK6P29122 969 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC16A1P53985 500 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ACTC1P68032 377 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ACTA1P68133 377 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 TMEM225Q6GV28 225 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 INO80CQ6PI98 192 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC35F2Q8IXU6 374 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 OR9K2Q8NGE7 335 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 NEIL3Q8TAT5 605 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 RAB2BQ8WUD1 216 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 EMC6Q9BV81 110 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ALG8Q9BVK2 526 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SF3B6Q9Y3B4 125 aaKnown RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 CENPBD1B2RD01 187 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 GAAP10253 952 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 NTF4P34130 210 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 TPBGQ13641 420 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 TMEM123Q8N131 208 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 KLHL36Q8N4N3 616 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SPRYD4Q8WW59 207 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 NDUFB11Q9NX14 153 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 K7EM74 188 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 SLC16A7O60669 478 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 ACTL6AO96019 429 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 PMP22Q01453 160 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 FMODQ06828 376 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
TRIM39-204ENST00000396548 PCK2Q16822 640 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 NOXO1Q8NFA2 376 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 WDR76Q9H967 626 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 SPRR3Q9UBC9 169 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 KLHDC2Q9Y2U9 406 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 ATMQ13315 3056 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 A0A1B0GVC2 190 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 DAPL1A0PJW8 107 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 CXCL13O43927 109 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 CYTIPO60759 359 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF43P17038 809 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 CENPAP49450 140 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 BDH1Q02338 343 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 GPAT4Q86UL3 456 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 P2RY8Q86VZ1 359 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 OR10H4Q8NGA5 316 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 OR6K6Q8NGW6 343 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF845Q96IR2 970 aaPredicted RBP11.31□□□□□ -0.6
TRIM39-204ENST00000396548 OR2M2Q96R28 347 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 TBX5Q99593 518 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 PCDHGB7Q9Y5F8 929 aa11.31□□□□□ -0.6
TRIM39-204ENST00000396548 CCRL2O00421 344 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 WISP2O76076 250 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CRABP1P29762 137 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 NAA10P41227 235 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 Q6ZS92 163 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SIAH3Q8IW03 269 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SNRNP27Q8WVK2 155 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CPNE4Q96A23 557 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 ADRB1P08588 477 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CPN1P15169 458 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 GADD45AP24522 165 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 THEM4Q5T1C6 240 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 RBMXL3Q8N7X1 1067 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SLC26A10Q8NG04 563 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 RPL3LQ92901 407 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 YIPF3Q9GZM5 350 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CCDC86Q9H6F5 360 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 HSMCR30P0CW71 290 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 CRYBB2P43320 205 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 LRFN4Q6PJG9 635 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 RPS4Y2Q8TD47 263 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms