RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 OR52W1Q6IF63 320 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 SSX6Q7RTT6 188 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 C1QL4Q86Z23 238 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 BAP18Q8IXM2 172 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 OR56A1Q8NGH5 318 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 SLC41A3Q96GZ6 507 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 AICDAQ9GZX7 198 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 OBP2AQ9NY56 170 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 SLC35A3Q9Y2D2 325 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 TIMM10BQ9Y5J6 103 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 POMT1Q9Y6A1 747 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 PLXND1Q9Y4D7 1925 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 FAM157CP0CG43 387 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 HIST1H1TP22492 207 aaPredicted RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 BCL6P41182 706 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 HTRA3P83110 453 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 FOXK2Q01167 660 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 CST6Q15828 149 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 OR10K2Q6IF99 312 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 FGF13Q92913 245 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 RAB3CQ96E17 227 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 CHST6Q9GZX3 395 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 RHOFQ9HBH0 211 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 POT1Q9NUX5 634 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 ERI3O43414 337 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 FARS2O95363 451 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 THY1P04216 161 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 SFTA3P0C7M3 94 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 GLP1RP43220 463 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 LASP1Q14847 261 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 SPRED2Q7Z698 418 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 TMEM255BQ8WV15 326 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 MS4A6EQ96DS6 147 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 HS6ST2Q96MM7 605 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 NCDNQ9UBB6 729 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 GPR55Q9Y2T6 319 aaPredicted RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 TRBV2A0A0J9YWF9 115 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF705EA8MWA4 302 aaPredicted RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 HMGN2P05204 90 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 CD5P06127 495 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 CD2P06729 351 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 NQO2P16083 231 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 BMP7P18075 431 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 MPIP34949 423 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF239Q16600 458 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 MRM1Q6IN84 353 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 ABHD17CQ6PCB6 329 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 DND1Q8IYX4 353 aaKnown RBP17.17■□□□□ 0.34
HOXC6-202ENST00000394331 ARRDC1Q8N5I2 433 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 BADQ92934 168 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 KLHL28Q9NXS3 571 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 LPAR3Q9UBY5 353 aa17.17■□□□□ 0.34
HOXC6-202ENST00000394331 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-202ENST00000394331 KAT7O95251 611 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CPT2P23786 658 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CD81P60033 236 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 TAF13Q15543 124 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 SSX2Q16385 188 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CACUL1Q86Y37 369 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 ACOT4Q8N9L9 421 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 FBXO17Q96EF6 278 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 PRDM7Q9NQW5 492 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 PCDHGA1Q9Y5H4 931 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 A0A1W2PR48 441 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 OR2T7P0C7T2 308 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CSNK2A2P19784 350 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-202ENST00000394331 RAB5AP20339 215 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 AVPR2P30518 371 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 KCNAB1Q14722 419 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 TP53I3Q53FA7 332 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 OLIG3Q7RTU3 272 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CCDC116Q8IYX3 515 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 PAQR4Q8N4S7 273 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-202ENST00000394331 OR2L5Q8NG80 312 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 OR2T27Q8NH04 317 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 PPP1R1CQ8WVI7 109 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 CD180Q99467 661 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF426Q9BUY5 554 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 TMEM231Q9H6L2 316 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 KCNK6Q9Y257 313 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 ATG4BQ9Y4P1 393 aa17.16■□□□□ 0.34
HOXC6-202ENST00000394331 RCBTB2O95199 551 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 STPG1Q5TH74 334 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 DMRTC2Q8IXT2 367 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-202ENST00000394331 SMIM8Q96KF7 97 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 SPSB2Q99619 263 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 CALML5Q9NZT1 146 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 MYO10Q9HD67 2058 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 RIIAD1A6NNX1 92 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 RNASEK-C17orf49H0YIS7 233 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 MAGEB4O15481 346 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-202ENST00000394331 ADH1BP00325 375 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 C5AR1P21730 350 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 ITPKBP27987 946 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 GJA4P35212 333 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 RUNX3Q13761 415 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 RBM39Q14498 530 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms