RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 LDOC1O95751 146 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-203ENST00000394269 DUSP3P51452 185 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-203ENST00000394269 INSM1Q01101 510 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-203ENST00000394269 GPR139Q6DWJ6 353 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 PLET1Q6UQ28 207 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 KRT77Q7Z794 578 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 TIGD4Q8IY51 512 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 KLHL15Q96M94 604 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 FRRS1LQ9P0K9 344 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 PISDQ9UG56 409 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 ZNF281Q9Y2X9 895 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 ACACBO00763 2458 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 PLA2G10O15496 165 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 LANCL1O43813 399 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 ANKRD34CP0C6C1 535 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 CAMK2DQ13557 499 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 TMEM225Q6GV28 225 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 GPX7Q96SL4 187 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-203ENST00000394269 CDCP1Q9H5V8 836 aa10.03□□□□□ -0.8
TCOF1-203ENST00000394269 PTHLHP12272 177 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 NR4A2P43354 598 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 CDC20Q12834 499 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.811e-6■■■□□ 18.6
TCOF1-203ENST00000394269 SLC43A2Q8N370 569 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 SLC22A8Q8TCC7 542 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 ABHD1Q96SE0 405 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 CMKLR1Q99788 373 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 SDHAF3Q9NRP4 125 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 MYEF2Q9P2K5 600 aaKnown RBP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 MOKQ9UQ07 419 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 TRAPPC4Q9Y296 219 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 DLL1O00548 723 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 OGG1O15527 345 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF823P16415 610 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 MPLP40238 635 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 KIR2DL3P43628 341 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 BIDP55957 195 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 EIF2B1Q14232 305 aaKnown RBP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 TRAM1Q15629 374 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 EEF1A1P5Q5VTE0 462 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 NCCRP1Q6ZVX7 275 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 FCRLAQ7L513 359 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 IL17RDQ8NFM7 739 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 NUBPLQ8TB37 319 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 TMEM106AQ96A25 262 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 CCNL2Q96S94 520 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-203ENST00000394269 TXNIPQ9H3M7 391 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 PPP1R3EQ9H7J1 279 aa10.02□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF879B4DU55 563 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PIN1P1O15428 100 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 EFNA2O43921 213 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TRIM3O75382 744 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 MT-ATP6P00846 226 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PRKAR1AP10644 381 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 EPXP11678 715 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TCN2P20062 427 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 CASP3P42574 277 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 MYBPHQ13203 477 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SELENBP1Q13228 472 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ALKBH1Q13686 389 aaKnown RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 GGTLC2Q14390 218 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF385CQ66K41 422 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PAMR1Q6UXH9 720 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 LGALS14Q8TCE9 139 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 DDIT4LQ96D03 193 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PRMT8Q9NR22 394 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 POLR1DQ9Y2S0 133 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 MEIOCA2RUB1 952 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TRABD2BA6NFA1 517 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ANKUB1A6NFN9 424 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ALOX5APP20292 161 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 HOXA6P31267 233 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PITPNBP48739 271 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SLC25A1P53007 311 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 IL11RAQ14626 422 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 H1FNTQ75WM6 255 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TMPRSS12Q86WS5 348 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SPACA9Q96E40 222 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 UBL7Q96S82 380 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ABCG5Q9H222 651 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 BEX1Q9HBH7 125 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 NUFIP1Q9UHK0 495 aaKnown RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PCDHGB2Q9Y5G2 931 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 MGAQ8IWI9 3026 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ATRXP46100 2492 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TRAV6A0A075B6T7 132 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SLC22A23A1A5C7 686 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 NOTOA8MTQ0 251 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 H0YC42 278 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 LYRM1O43325 122 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SLC19A2O60779 497 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 ADRB1P08588 477 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TDGF1P13385 188 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 APEHP13798 732 aaKnown RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 KLK2P20151 261 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms