RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 TMEM184AQ6ZMB5 413 aa10.96□□□□□ -0.66
SYNPO-202ENST00000394243 USP53Q70EK8 1073 aa10.96□□□□□ -0.66
SYNPO-202ENST00000394243 VAMP8Q9BV40 100 aa10.96□□□□□ -0.66
SYNPO-202ENST00000394243 NPFFR2Q9Y5X5 522 aa10.96□□□□□ -0.66
SYNPO-202ENST00000394243 A0A087WUU8 490 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 A8MVM7 634 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 QDPRP09417 244 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 RAB5AP20339 215 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 GPM6BQ13491 265 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 ENDOGQ14249 297 aaKnown RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 LCN15Q6UWW0 184 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 Q6ZSR9 355 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 USP51Q70EK9 711 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 L3MBTL4Q8NA19 623 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 UBXN10Q96LJ8 280 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MOB1AQ9H8S9 216 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CGGBP1Q9UFW8 167 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SELENOFO60613 162 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MTHFD2P13995 350 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 TEKQ02763 1124 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 RXFP4Q8TDU9 374 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 RPUSD4Q96CM3 377 aaKnown RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 ABHD6Q9BV23 337 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 NECAP2Q9NVZ3 263 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 NDUFB11Q9NX14 153 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 GDF2Q9UK05 429 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 URB1O60287 2271 aaKnown RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MN1Q10571 1320 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 BTBD17A6NE02 478 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 GJB3O75712 270 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SOD2P04179 222 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 EIF4EP06730 217 aaKnown RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CD63P08962 238 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 ACKR1Q16570 336 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MOGAT2Q3SYC2 334 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CBARPQ8N350 705 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 PHYHIPQ92561 330 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 UCN3Q969E3 161 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SLCO4A1Q96BD0 722 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 YIPF6Q96EC8 236 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 C1orf105O95561 183 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 DUSP1P28562 367 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SDHAP31040 664 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MEOX2P50222 304 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 HHEXQ03014 270 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MEP1BQ16820 701 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 PAQR6Q6TCH4 344 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 NPSR1Q6W5P4 371 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 OR1J2Q8NGS2 313 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CHST8Q9H2A9 424 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 CBLCQ9ULV8 474 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 STRAPQ9Y3F4 350 aaKnown RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 DUX1O43812 170 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 HIST1H1TP22492 207 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-202ENST00000394243 MPGP29372 298 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 FABP9Q0Z7S8 132 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SLC16A13Q7RTY0 426 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 SRRQ9GZT4 340 aa10.95□□□□□ -0.66
SYNPO-202ENST00000394243 ANKRD61A6NGH8 418 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 FGF7P21781 194 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 EVX1P49640 407 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF528Q3MIS6 628 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 SMUG1Q53HV7 270 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 OVCH1Q7RTY7 1134 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 OR51A2Q8NGJ7 313 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF480Q8WV37 535 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ASB11Q8WXH4 323 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 SMIM14Q96QK8 99 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 GPR62Q9BZJ7 368 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ACAD8Q9UKU7 415 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 OR52A4PA6NMU1 304 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ST8SIA3O43173 380 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 CD37P11049 281 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 KIR2DL3P43628 341 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
SYNPO-202ENST00000394243 JAG1P78504 1218 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 AQP6Q13520 282 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 BAP18Q8IXM2 172 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 PRSS35Q8N3Z0 413 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 LSMEM1Q8N8F7 131 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 MZB1Q8WU39 189 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 LPAR4Q99677 370 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 NKX2-4Q9H2Z4 354 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 FAM208AQ9UK61 1670 aaKnown RBP10.94□□□□□ -0.66
SYNPO-202ENST00000394243 TMEM129A0AVI4 362 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 SNRPNP63162 240 aaKnown RBP10.94□□□□□ -0.66
SYNPO-202ENST00000394243 NOGQ13253 232 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 LTB4RQ15722 352 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF684Q5T5D7 378 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF534Q76KX8 674 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF511Q8NB15 262 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 NDRG4Q9ULP0 352 aaKnown RBP10.94□□□□□ -0.66
SYNPO-202ENST00000394243 FGF18O76093 207 aa10.94□□□□□ -0.66
SYNPO-202ENST00000394243 UBE2G2P60604 165 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms