RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ADCYAP1P18509 176 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 FBLP22087 321 aaKnown RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 SDHAP31040 664 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 SPHARQ15513 63 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 CASP12Q6UXS9 341 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 FRRS1Q6ZNA5 592 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 TMUB2Q71RG4 321 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 RLIMQ9NVW2 624 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 GABRA3P34903 492 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 ETV5P41161 510 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 ANXA11P50995 505 aaKnown RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 DUSP3P51452 185 aaPredicted RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 RAG2P55895 527 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 CLDN6P56747 220 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 NUTF2P61970 127 aaKnown RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 RHBDD2Q6NTF9 364 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 FIGNL1Q6PIW4 674 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 ZAR1Q86SH2 424 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 OR10K1Q8NGX5 313 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 OR52P1PQ8NH57 321 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 BBS10Q8TAM1 723 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 ADAMTS18Q8TE60 1221 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 PTPMT1Q8WUK0 201 aaPredicted RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 SENP5Q96HI0 755 aaPredicted RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 SDF2Q99470 211 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 GPR55Q9Y2T6 319 aaPredicted RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 DSPPQ9NZW4 1301 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 KNTC1P50748 2209 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 NPIPA5A0A0B4J1W7 369 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 DUXAA6NLW8 204 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 COLCA2A8K830 154 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 NPIPA7E9PJI5 369 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 FRS3O43559 492 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 SCRG1O75711 98 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 IFNA10P01566 189 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 TFP02787 698 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 NPIPA8P0DM63 369 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 CCL4P13236 92 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 CRABP1P29762 137 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 CAV3P56539 151 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 PSG6Q00889 435 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 MAJINQ3KP22 176 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 TCTN3Q6NUS6 607 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 UQCC3Q6UW78 93 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 LRRN1Q6UXK5 716 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 FEVQ99581 238 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 PNO1Q9NRX1 252 aaKnown RBP17.25■□□□□ 0.35
CCDC50-202ENST00000392456 THSD1Q9NS62 852 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 PIPOXQ9P0Z9 390 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 WASF3Q9UPY6 502 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 HPXP02790 462 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF883P0CG24 379 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 TFPIP10646 304 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 PEPDP12955 493 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 CD59P13987 128 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 NNATQ16517 81 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 LCN10Q6JVE6 187 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 GSG1LQ6UXU4 331 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 CDRT4Q8N9R6 151 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 RFT1Q96AA3 541 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 ORAI1Q96D31 301 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF354BQ96LW1 612 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 KCTD7Q96MP8 289 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 OCSTAMPQ9BR26 566 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 EGLN1Q9GZT9 426 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 PRDM13Q9H4Q3 707 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 KCNE5Q9UJ90 142 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 RARRES3Q9UL19 164 aa17.25■□□□□ 0.35
CCDC50-202ENST00000392456 RIF1Q5UIP0 2472 aaKnown RBP17.24■□□□□ 0.35
CCDC50-202ENST00000392456 IGKV3D-11A0A0A0MRZ8 115 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 M0R129 80 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 FZD7O75084 574 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 CLPSP04118 112 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 CDH12P55289 794 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ZFP36L1Q07352 338 aaKnown RBP17.24■□□□□ 0.35
CCDC50-202ENST00000392456 MAPK14Q16539 360 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ARHGAP11BQ3KRB8 267 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 LIPKQ5VXJ0 399 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 RELL2Q8NC24 303 aaPredicted RBP17.24■□□□□ 0.35
CCDC50-202ENST00000392456 OR1F2PQ96R84 312 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF559Q9BR84 538 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 CHIAQ9BZP6 476 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 DUSP22Q9NRW4 184 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ENPP4Q9Y6X5 453 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 BLACEA4D250 179 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 CXorf65A6NEN9 183 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 C17orf105B2RV13 164 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 AQP8O94778 261 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 IFNW1P05000 195 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 RFX3P48380 749 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 E2F1Q01094 437 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 LIPNQ5VXI9 398 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 SUMF1Q8NBK3 374 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 OR6T1Q8NGN1 323 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 C16orf52Q8NHV5 167 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 VSTM2LQ96N03 204 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ATF6BQ99941 703 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 THAP7Q9BT49 309 aaPredicted RBP17.24■□□□□ 0.35
CCDC50-202ENST00000392456 POLDIP3Q9BY77 421 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms