RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 SLC35F3Q8IY50 421 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF433Q8N7K0 673 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 OR14A2Q96R54 314 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 OR1F2PQ96R84 312 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ADOQ96SZ5 270 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ORAI3Q9BRQ5 295 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SLC6A15Q9H2J7 730 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 EXOSC3Q9NQT5 275 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SLC25A12O75746 678 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 UCHL1P09936 223 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 EPXP11678 715 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 MYF5P13349 255 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 GRPRP30550 384 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 GABRA4P48169 554 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 DCAF7P61962 342 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 RRAS2P62070 204 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 PPA1Q15181 289 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF74Q16587 644 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ATG4DQ86TL0 474 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 TIGD4Q8IY51 512 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 PRR18Q8N4B5 295 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 YIPF7Q8N8F6 280 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 LMF1Q96S06 567 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 GPX7Q96SL4 187 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 PDCD1LG2Q9BQ51 273 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 COPS7AQ9UBW8 275 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 HIF3AQ9Y2N7 669 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF281Q9Y2X9 895 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 CLDN16Q9Y5I7 305 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 A0A0B4J293 547 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 A0A0G2JK05 382 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 MFSD2BA6NFX1 497 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 FRG2CA6NGY1 282 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 HCRTR2O43614 444 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 PIAS2O75928 621 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 RPP14O95059 124 aaKnown RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ATF1P18846 271 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 SLC25A1P53007 311 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 SLC37A1P57057 533 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 CD226Q15762 336 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 TIGD3Q6B0B8 471 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 SEZ6L2Q6UXD5 910 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 SLC16A9Q7RTY1 509 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 PRR22Q8IZ63 422 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 DEFB123Q8N688 67 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 OR2T4Q8NH00 348 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 HAVCR2Q8TDQ0 301 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 PTPMT1Q8WUK0 201 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 DAZLQ92904 295 aaKnown RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 UPRTQ96BW1 309 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 MVB12AQ96EY5 273 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 TBL1XR1Q9BZK7 514 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 MED28Q9H204 178 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 IKZF2Q9UKS7 526 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 TMEM184BQ9Y519 407 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 FITM1A5D6W6 292 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 PSMD9O00233 223 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 IMPA2O14732 288 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 GMFGO60234 142 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 IGF2P01344 180 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 FBLP22087 321 aaKnown RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 TACR3P29371 465 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 SDHAP31040 664 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 STARP49675 285 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 RPS4XP62701 263 aaKnown RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ETFDHQ16134 617 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 RHOUQ7L0Q8 258 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ZSCAN1Q8NBB4 408 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 DTD1Q8TEA8 209 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ABHD1Q96SE0 405 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 LAT2Q9GZY6 243 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 CHRNA10Q9GZZ6 450 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 NOX4Q9NPH5 578 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 AKAP7Q9P0M2 348 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-204ENST00000392003 COPZ2Q9P299 210 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 CAMK2AQ9UQM7 478 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 RNF215Q9Y6U7 377 aa8.76□□□□□ -1.01
COL6A3-204ENST00000392003 ASXL3Q9C0F0 2248 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 FAM74A7A6NL05 159 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 XKRYO14609 159 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 IGHV2-70P01814 119 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 CFIP05156 583 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 F13BP05160 661 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 MAPK3P27361 379 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 CDKN2AP42771 156 aaKnown RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 EPHA4P54764 986 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 HSD11B2P80365 405 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SKP2Q13309 424 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 ELAVL1Q15717 326 aaKnown RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 FAM74A3Q4VXF1 159 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 GPR139Q6DWJ6 353 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 CBLN3Q6UW01 205 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SLC29A4Q7RTT9 530 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SYT9Q86SS6 491 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 STPG2Q8N412 459 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 FAM71CQ8NEG0 241 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms