RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZNF493Q6ZR52 646 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MMS22LQ6ZRQ5 1243 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC80Q76M96 950 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 FA2HQ7L5A8 372 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF571Q7Z3V5 609 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 DHDDSQ86SQ9 333 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF546Q86UE3 836 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 IQCA1Q86XH1 822 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GKN2Q86XP6 184 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ECHDC2Q86YB7 292 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MYLK4Q86YV6 388 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RBM45Q8IUH3 476 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 WDR49Q8IV35 697 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 LINC00518Q8N0U6 118 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 NUP93Q8N1F7 819 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 STPG2Q8N412 459 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 BPIFB2Q8N4F0 458 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MREGQ8N565 214 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 WDTC1Q8N5D0 677 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ATP6V0D2Q8N8Y2 350 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SMYD1Q8NB12 490 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 CYB561A3Q8NBI2 242 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC197Q8NCU1 140 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 BPIFB6Q8NFQ5 453 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR11H7Q8NGC8 314 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR5T3Q8NGG3 340 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR8B12Q8NGG6 310 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR52M1Q8NGK5 317 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR9I1Q8NGQ6 314 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR2K2Q8NGT1 345 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR6N1Q8NGY5 312 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR8K3Q8NH51 312 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR52N1Q8NH53 320 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MFSD8Q8NHS3 518 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 LHFPL5Q8TAF8 219 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RDH11Q8TC12 318 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 UCMAQ8WVF2 138 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TRUB1Q8WWH5 349 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MR1Q95460 341 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ITFG2Q969R8 447 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TTC17Q96AE7 1141 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 UPRTQ96BW1 309 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 DDIT4LQ96D03 193 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PERPQ96FX8 193 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 LTV1Q96GA3 475 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GPATCH3Q96I76 525 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PGLYRP4Q96LB8 373 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PPP1R36Q96LQ0 422 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 COG8Q96MW5 612 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF681Q96N22 645 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TSSK2Q96PF2 358 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PARK7Q99497 189 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 CPNE1Q99829 537 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 KLHDC3Q9BQ90 382 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 NAT9Q9BTE0 207 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 KIFC1Q9BW19 673 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC25A2Q9BXI2 301 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RTFDC1Q9BY42 306 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF436Q9C0F3 470 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 IMUPQ9GZP8 106 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 NAT10Q9H0A0 1025 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 C20orf85Q9H1P6 137 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GANQ9H2C0 597 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SMARCAD1Q9H4L7 1026 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 CWH43Q9H720 699 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM185BQ9H7F4 350 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 VSIRQ9H7M9 311 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GPN2Q9H9Y4 310 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 UGT1A7Q9HAW7 530 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 UGT1A10Q9HAW8 530 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 UGT1A8Q9HAW9 530 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC38A10Q9HBR0 1119 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 XAB2Q9HCS7 855 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 ABCB9Q9NP78 766 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PRSS16Q9NQE7 514 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RPRD1BQ9NQG5 326 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PIH1D3Q9NQM4 214 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 C8orf4Q9NR00 106 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PDRG1Q9NUG6 133 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OLAHQ9NV23 265 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RHBDL2Q9NX52 303 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 QPCTLQ9NXS2 382 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PRO2289Q9P1D8 64 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 NFKBIL1Q9UBC1 381 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GALPQ9UBC7 116 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PISDQ9UG56 409 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RWDD2AQ9UIY3 292 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 MMP17Q9ULZ9 603 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAF3IP3Q9Y228 551 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RUVBL2Q9Y230 463 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 RCL1Q9Y2P8 373 aaKnown RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GTF3C3Q9Y5Q9 886 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAPPC1Q9Y5R8 145 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 USP16Q9Y5T5 823 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 SESN1Q9Y6P5 492 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAH11Q96DT5 4516 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 KIAA1549Q9HCM3 1950 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 DYSFO75923 2080 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 NUP214P35658 2090 aaPredicted RBP-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 KDRP35968 1356 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms