RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 KCNK17Q96T54 332 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 FEVQ99581 238 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 NIPSNAP1Q9BPW8 284 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 DGCR6LQ9BY27 220 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 MRPL13Q9BYD1 178 aaKnown RBP14.17□□□□□ -0.14
SNRPB-201ENST00000381342 PLA2G12AQ9BZM1 189 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 NELFAQ9H3P2 528 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 NRIP3Q9NQ35 241 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 SLC17A5Q9NRA2 495 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 GRHPRQ9UBQ7 328 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 PLEKHA6Q9Y2H5 1048 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 MAGED1Q9Y5V3 778 aaPredicted RBP14.17□□□□□ -0.14
SNRPB-201ENST00000381342 CDH10Q9Y6N8 788 aa14.17□□□□□ -0.14
SNRPB-201ENST00000381342 A0A096LPE4 126 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 A0A1W2PPZ6 126 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 A6NIZ1 184 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 ZNF99A8MXY4 864 aaPredicted RBP14.16□□□□□ -0.14
SNRPB-201ENST00000381342 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 SLC2A10O95528 541 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 RAF1P04049 648 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 HRGP04196 525 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 QDPRP09417 244 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 PRKACGP22612 351 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 FASP25445 335 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 SDHAP31040 664 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 HOXC12P31275 282 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 SLC6A6P31641 620 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 RAP1BP61224 184 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 RAP1AP62834 184 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 PPA1Q15181 289 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 HIST3H3Q16695 136 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 RFX4Q33E94 735 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 TBRG1Q3YBR2 411 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 SHQ1Q6PI26 577 aaKnown RBP14.16□□□□□ -0.14
SNRPB-201ENST00000381342 LRFN4Q6PJG9 635 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 SPNS3Q6ZMD2 512 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 RASSF6Q6ZTQ3 369 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 C17orf78Q8N4C9 275 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 ARIH2OSQ8N7S6 290 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 WDR31Q8NA23 367 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 OR8D4Q8NGM9 314 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 MAGEE2Q8TD90 523 aaPredicted RBP14.16□□□□□ -0.14
SNRPB-201ENST00000381342 HSD17B8Q92506 261 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 FOXC2Q99958 501 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 IFT27Q9BW83 186 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 TBC1D23Q9NUY8 699 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 STX18Q9P2W9 335 aaKnown RBP14.16□□□□□ -0.14
SNRPB-201ENST00000381342 IER3IP1Q9Y5U9 82 aa14.16□□□□□ -0.14
SNRPB-201ENST00000381342 LRBAP50851 2863 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 IGKV1D-43A0A0B4J1Z2 117 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 DEFB108AA8MXU0 73 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 CENPBD1B2RD01 187 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 H3BNX3 289 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 SOCS2O14508 198 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 ARHGEF9O43307 516 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 ENTPD5O75356 428 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 IGFBP1P08833 259 aaPredicted RBP14.15□□□□□ -0.14
SNRPB-201ENST00000381342 FCGR1AP12314 374 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 B4GALT1P15291 398 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 RPS6KA3P51812 740 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 TUBA1BP68363 451 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 TUBA4AP68366 448 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 CLEC12AQ5QGZ9 265 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 ANKRD16Q6P6B7 361 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 KLHL17Q6TDP4 642 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 KLHL24Q6TFL4 600 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 PAMR1Q6UXH9 720 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 TUBA1AQ71U36 451 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 P2RY8Q86VZ1 359 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 OR52L1Q8NGH7 329 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 HTRA1Q92743 480 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 BCL2L2Q92843 193 aaPredicted RBP14.15□□□□□ -0.14
SNRPB-201ENST00000381342 MCHR2Q969V1 340 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 NMD3Q96D46 503 aaKnown RBP14.15□□□□□ -0.14
SNRPB-201ENST00000381342 MUCL1Q96DR8 90 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 PIK3IP1Q96FE7 263 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 ERMAPQ96PL5 475 aaPredicted RBP14.15□□□□□ -0.14
SNRPB-201ENST00000381342 FOXB1Q99853 325 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.14
SNRPB-201ENST00000381342 ALG12Q9BV10 488 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 LIME1Q9H400 295 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 NPAP1Q9NZP6 1156 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 KIF17Q9P2E2 1029 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 POFUT2Q9Y2G5 429 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 SLC25A15Q9Y619 301 aa14.15□□□□□ -0.14
SNRPB-201ENST00000381342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.14□□□□□ -0.15
SNRPB-201ENST00000381342 XKRYO14609 159 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 IMPA2O14732 288 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 DHHO43323 396 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 TP53P04637 393 aaPredicted RBP14.14□□□□□ -0.15
SNRPB-201ENST00000381342 GSTM3P21266 225 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 TESK1Q15569 626 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 GPR139Q6DWJ6 353 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 RPL13AP3Q6NVV1 102 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 ZFP1Q6P2D0 407 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 ZNF813Q6ZN06 617 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 ATG16L2Q8NAA4 619 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 OR5K1Q8NHB7 308 aa14.14□□□□□ -0.15
SNRPB-201ENST00000381342 BOD1Q96IK1 185 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms