RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LRRN3E7EW58 273 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 SERPINI2O75830 405 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 BCL10O95999 233 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 IGHG1P01857 330 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 SERPINA5P05154 406 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 NR2C1P13056 603 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 RBM34P42696 430 aaKnown RBP11.2□□□□□ -0.62
RPAIN-202ENST00000381208 GIPRP48546 466 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
RPAIN-202ENST00000381208 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ERICH5Q6P6B1 374 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-202ENST00000381208 NANOGNBQ7Z5D8 188 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 SLC22A24Q8N4F4 322 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 OR8J3Q8NGG0 315 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF75AQ96N20 296 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ECSITQ9BQ95 431 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 LRMDAQ9H2I8 198 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 TAS2R5Q9NYW4 299 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-202ENST00000381208 REV1Q9UBZ9 1251 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 GPR160Q9UJ42 338 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF346Q9UL40 294 aaKnown RBP11.2□□□□□ -0.62
RPAIN-202ENST00000381208 SLC7A7Q9UM01 511 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 SH3PXD2BA1X283 911 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 PHF1O43189 567 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-202ENST00000381208 DHHO43323 396 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 TGFAP01135 160 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 ADRA2AP08913 450 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 ASAH2BP0C7U1 165 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 THRBP10828 461 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 UMPSP11172 480 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 IGFBP5P24593 272 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 IFNA8P32881 189 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF84P51523 738 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 PIGFQ07326 219 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 SELPLGQ14242 412 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM53Q6P2H8 277 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 CDK20Q8IZL9 346 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 OR1J2Q8NGS2 313 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 VANGL1Q8TAA9 524 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-202ENST00000381208 TAMM41Q96BW9 452 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 FBN3Q75N90 2809 aa11.19□□□□□ -0.62
RPAIN-202ENST00000381208 A0A1W2PRG6 482 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 GMNCA6NCL1 334 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 MCIDASD6RGH6 385 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 OR5F1O95221 314 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 LYPD3O95274 346 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 MT-ND1P03886 318 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 TROVE2P10155 538 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 MRPS11P82912 194 aaKnown RBP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 PLP2Q04941 152 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 RIN1Q13671 783 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 FXNQ16595 210 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 MOGQ16653 247 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 SLC36A2Q495M3 483 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 WDR88Q6ZMY6 472 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 PHC2Q8IXK0 858 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 LINC01356Q8N9X3 169 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 THOC1Q96FV9 657 aaKnown RBP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 MRPL37Q9BZE1 423 aaKnown RBP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF224Q9NZL3 707 aa11.18□□□□□ -0.62
RPAIN-202ENST00000381208 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
RPAIN-202ENST00000381208 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 KPNA4O00629 521 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-202ENST00000381208 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-202ENST00000381208 LILRA1O75019 489 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 THY1P04216 161 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 PGA4P0DJD7 388 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 PGA3P0DJD8 388 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 APEX1P27695 318 aaKnown RBP11.17□□□□□ -0.62
RPAIN-202ENST00000381208 GZMMP51124 257 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM33P57088 247 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 CLRN1P58418 232 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 TAS2R41P59536 307 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 RAB39AQ14964 217 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 UNQ6126/PRO20091Q6UXV3 157 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 CARM1Q86X55 608 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 CALHM3Q86XJ0 350 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 RBM45Q8IUH3 476 aaKnown RBP11.17□□□□□ -0.62
RPAIN-202ENST00000381208 SKA3Q8IX90 412 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 LIPHQ8WWY8 451 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 RDH5Q92781 318 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 LRRC58Q96CX6 371 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 BCL2L14Q9BZR8 327 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 KCNN2Q9H2S1 579 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 RNF121Q9H920 327 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms