RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TXNIPQ9H3M7 391 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 KLHDC2Q9Y2U9 406 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 PRSS37A4D1T9 235 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 ANKUB1A6NFN9 424 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 H7C1C5 153 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 ADAM10O14672 748 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 OR6A2O95222 327 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 LCN6P62502 163 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 DCDP81605 110 aaKnown RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 C17orf67Q0P5P2 114 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 MFSD13AQ14CX5 517 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 C1QL3Q5VWW1 255 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 PM20D2Q8IYS1 436 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 OR8K3Q8NH51 312 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 ASB17Q8WXJ9 295 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 RGP1Q92546 391 aaPredicted RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 UPRTQ96BW1 309 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 SLC25A36Q96CQ1 311 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 C7orf50Q9BRJ6 194 aaKnown RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 MRPL39Q9NYK5 338 aaKnown RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 VSX1Q9NZR4 365 aaPredicted RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 PCDHGA9Q9Y5G4 932 aaKnown RBP19.43■□□□□ 0.7
TRIM54-202ENST00000380075 CACNG2Q9Y698 323 aa19.43■□□□□ 0.7
TRIM54-202ENST00000380075 WDFY3Q8IZQ1 3526 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 TRBV5-5A0A0J9YX44 114 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 IFITM5A6NNB3 132 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 PSMD9O00233 223 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 EEF1E1O43324 174 aaKnown RBP19.42■□□□□ 0.7
TRIM54-202ENST00000380075 GSTZ1O43708 216 aaPredicted RBP19.42■□□□□ 0.7
TRIM54-202ENST00000380075 SCRG1O75711 98 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 AKR7A3O95154 331 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 RAF1P04049 648 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 CYC1P08574 325 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 DLX5P56178 289 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 ACKR1Q16570 336 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 COL28A1Q2UY09 1125 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 HES3Q5TGS1 186 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 CDCP2Q5VXM1 449 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 TIGD3Q6B0B8 471 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 SHISA6Q6ZSJ9 500 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 COMMD4Q9H0A8 199 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 ABCG5Q9H222 651 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 NUFIP1Q9UHK0 495 aaKnown RBP19.42■□□□□ 0.7
TRIM54-202ENST00000380075 IKZF2Q9UKS7 526 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 V9GY05 133 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 UNC13CQ8NB66 2214 aa19.42■□□□□ 0.7
TRIM54-202ENST00000380075 TVP23AA6NH52 213 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 TMEM212A6NML5 194 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 C17orf51A8MQB3 221 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 C11orf98E9PRG8 122 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 RPP14O95059 124 aaKnown RBP19.41■□□□□ 0.7
TRIM54-202ENST00000380075 NKX2-5P52952 324 aaPredicted RBP19.41■□□□□ 0.7
TRIM54-202ENST00000380075 RASGEF1BQ0VAM2 473 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 SYT9Q86SS6 491 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 OTOSQ8NHW6 89 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 FRRS1LQ9P0K9 344 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 B9D1Q9UPM9 204 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 ALG5Q9Y673 324 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 IGHV5-10-1A0A0J9YXX1 117 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 ACOD1A6NK06 481 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 VSTM2BA6NLU5 285 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 INMT-MINDY4F8WBC2 141 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 PLPP3O14495 311 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 LANCL1O43813 399 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 MT-CO3P00414 261 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 TFPIP10646 304 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 PLA1AQ53H76 456 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 FDX2Q6P4F2 183 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 DPY19L4Q7Z388 723 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 OR5L2Q8NGL0 311 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 LGALS14Q8TCE9 139 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 TCF7L1Q9HCS4 588 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 MPDZO75970 2070 aa19.41■□□□□ 0.7
TRIM54-202ENST00000380075 IGHV3-20A0A0C4DH32 117 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 ASB18Q6ZVZ8 466 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 TCTE3Q8IZS6 198 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 SLC38A9Q8NBW4 561 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 OR2G2Q8NGZ5 317 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 TTC9Q92623 222 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 NSMAFQ92636 917 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 YIPF5Q969M3 257 aa19.4■□□□□ 0.7
TRIM54-202ENST00000380075 CENPBD1B2RD01 187 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 AGRPO00253 132 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 ZNF254O75437 659 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 CALCBP10092 127 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 APOBEC1P41238 236 aaKnown RBP19.39■□□□□ 0.7
TRIM54-202ENST00000380075 MAP2K6P52564 334 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 EMP2P54851 167 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 ZFP36L1Q07352 338 aaKnown RBP19.39■□□□□ 0.7
TRIM54-202ENST00000380075 CLPPQ16740 277 aaPredicted RBP19.39■□□□□ 0.7
TRIM54-202ENST00000380075 PAPD4Q6PIY7 484 aaKnown RBP19.39■□□□□ 0.7
TRIM54-202ENST00000380075 TOMM5Q8N4H5 51 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 ZNF248Q8NDW4 579 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 THEM6Q8WUY1 208 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 RNF138Q8WVD3 245 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 HSD17B8Q92506 261 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 HGDQ93099 445 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 AKAP7Q9P0M2 348 aaPredicted RBP19.39■□□□□ 0.7
TRIM54-202ENST00000380075 COPZ2Q9P299 210 aa19.39■□□□□ 0.7
TRIM54-202ENST00000380075 FER1L5A0AVI2 2057 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms