RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FCRLAQ7L513 359 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GLCCI1Q86VQ1 547 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 OR5D14Q8NGL3 314 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 ADAMTS14Q8WXS8 1223 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TCEAL3Q969E4 200 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SPACA9Q96E40 222 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 C10orf90Q96M02 699 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 NOX4Q9NPH5 578 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 CAMK2AQ9UQM7 478 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SIGLEC7Q9Y286 467 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 AKR7A2O43488 359 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 NAT1P18440 290 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SNU13P55769 128 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 HSF1Q00613 529 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 WDR74Q6RFH5 385 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC16A9Q7RTY1 509 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 COMMD7Q86VX2 200 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 CLDN22Q8N7P3 220 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SGCZQ96LD1 299 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 VSTM2LQ96N03 204 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 MNTQ99583 582 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 MEPEQ9NQ76 525 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 MGAMO43451 1857 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 DISC1C4P0D8 188 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 WRBO00258 174 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC43A1O75387 559 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 ENPP1P22413 925 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 UGT2B10P36537 528 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GPR50Q13585 617 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 EBPQ15125 230 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 ARTNQ5T4W7 220 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 PLCZ1Q86YW0 608 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GALNT11Q8NCW6 608 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GPR119Q8TDV5 335 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SCARF2Q96GP6 870 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TXNDC15Q96J42 360 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 APMAPQ9HDC9 416 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 CHST11Q9NPF2 352 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 A6NLC8 198 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TNFRSF10AO00220 468 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 HSPA12AO43301 675 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 LCN1P31025 176 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 LSM11P83369 360 aaKnown RBP eCLIP12.91□□□□□ -0.348e-8■□□□□ 11
SHROOM1-203ENST00000378679 RNASE10Q5GAN6 216 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 PMS2CLQ68D20 193 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 C12orf73Q69YU5 71 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GRAMD2AQ8IUY3 354 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 DYNC2LI1Q8TCX1 351 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 KTI12Q96EK9 354 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SARGQ9BW04 601 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 C11orf54Q9H0W9 315 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 ACOXLQ9NUZ1 547 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM212A6NML5 194 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 CAPZA1P52907 286 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 SELENOVP59797 346 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 Q499Y3 187 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 LRRC28Q86X40 367 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 TM4SF19Q96DZ7 209 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 ERVMER34-1Q9H9K5 563 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 AKIP1Q9NQ31 210 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 S100A6P06703 90 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 ANXA3P12429 323 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 RAB3AP20336 220 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 NPR2P20594 1047 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 ALKBH1Q13686 389 aaKnown RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 FAM109AQ8N4B1 249 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 OR13C9Q8NGT0 318 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 THAP7Q9BT49 309 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
SHROOM1-203ENST00000378679 TEX13DA0A0J9YY54 714 aaPredicted RBP12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 ARSBP15848 533 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 FOXL2P58012 376 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 IFITM3Q01628 133 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF117Q03924 483 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 FOXF1Q12946 379 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 ESPNLQ6ZVH7 1005 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 OR5T2Q8NGG2 359 aa12.9□□□□□ -0.35
SHROOM1-203ENST00000378679 SYNPRQ8TBG9 265 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms