RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 OBP2AQ9NY56 170 aa7.72□□□□□ -1.17
VPS36-201ENST00000378060 DAPP1Q9UN19 280 aa7.72□□□□□ -1.17
VPS36-201ENST00000378060 NINQ8N4C6 2090 aa7.72□□□□□ -1.17
VPS36-201ENST00000378060 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.71□□□□□ -1.17
VPS36-201ENST00000378060 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.71□□□□□ -1.17
VPS36-201ENST00000378060 A0A1W2PR48 441 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 TMEM221A6NGB7 291 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 HSPB2A8KAH6 182 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 TNFRSF10CO14798 259 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 TMPRSS11DO60235 418 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 SUSD5O60279 629 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 ZNF780AO75290 641 aaPredicted RBP7.71□□□□□ -1.17
VPS36-201ENST00000378060 FBXO24O75426 580 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 MT-CO2P00403 227 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 HBE1P02100 147 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 CD1EP15812 388 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 SNU13P55769 128 aaKnown RBP7.71□□□□□ -1.17
VPS36-201ENST00000378060 FABP5Q01469 135 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 HSPB2Q16082 182 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 FAM78AQ5JUQ0 283 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 LIPNQ5VXI9 398 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 OPN5Q6U736 354 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 MDGA2Q7Z553 956 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 Q96M85 177 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 PDCD1LG2Q9BQ51 273 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 RAB9BQ9NP90 201 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 WDFY4Q6ZS81 3184 aa7.71□□□□□ -1.17
VPS36-201ENST00000378060 ASPDHA6ND91 283 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 A8MVM7 634 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 SNRPGP15A8MWD9 76 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 PRKRAO75569 313 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 CNOT4O95628 575 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 B3GALT4O96024 378 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 CD63P08962 238 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 GABRB1P18505 474 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 CPT2P23786 658 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 FGF9P31371 208 aaPredicted RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 DIO1P49895 249 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 RACK1P63244 317 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 C17orf67Q0P5P2 114 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 EXOSC6Q5RKV6 272 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 GLYATL3Q5SZD4 288 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 HEPHL1Q6MZM0 1159 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 TMUB2Q71RG4 321 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 SPPL3Q8TCT6 385 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 C3orf49Q96BT1 292 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 WDFY2Q96P53 400 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 ATP13A2Q9NQ11 1180 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 VSX1Q9NZR4 365 aaPredicted RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 MYO16Q9Y6X6 1858 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 SMLR1H3BR10 107 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 NRG2O14511 850 aaPredicted RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 OR2F2O95006 317 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 WDPCPO95876 746 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 LPLP06858 475 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 CNR1P21554 472 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 GABRR1P24046 479 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 TGFBR1P36897 503 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 OR1D4P47884 311 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 RAB5CP51148 216 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 HSD17B7P56937 341 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 OR2F1Q13607 317 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 EMC4Q5J8M3 183 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 TMEM99Q8N816 258 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 ZNF680Q8NEM1 530 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 OR52I2Q8NH67 350 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 ASB13Q8WXK3 278 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 RSPRY1Q96DX4 576 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 SEMA6CQ9H3T2 930 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 MRPS28Q9Y2Q9 187 aaKnown RBP7.71□□□□□ -1.18
VPS36-201ENST00000378060 WIF1Q9Y5W5 379 aa7.71□□□□□ -1.18
VPS36-201ENST00000378060 TMED7-TICAM2A0A0A6YYA0 188 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 AGAP14A8MT82 685 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 AIPO00170 330 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PIP5K1CO60331 668 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 EIF4E2O60573 245 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 PRSS23O95084 383 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 UTS2O95399 124 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 DDAH2O95865 285 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 IGFBP1P08833 259 aaPredicted RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 ZNF28P17035 718 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 MLC1Q15049 377 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 ZNF750Q32MQ0 723 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 FBXW12Q6X9E4 464 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 MED25Q71SY5 747 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 WDSUB1Q8N9V3 476 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SLC35A4Q96G79 324 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TOE1Q96GM8 510 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 TPSD1Q9BZJ3 242 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SMIM3Q9BZL3 60 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 ULBP2Q9BZM5 246 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 ZNF225Q9UK10 706 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TMED7Q9Y3B3 224 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 BRWD1Q9NSI6 2320 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 STK17BO94768 372 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SERPINA2P20848 420 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 GALP22466 123 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 BSGP35613 385 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms