RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 A0A0D9SG52 128 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 A0A1B0GTQ1 180 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 H7C417 338 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 SGCEO43556 437 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 RBBP9O75884 186 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 DCDP81605 110 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 ARMC10Q8N2F6 343 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 BPIFA2Q96DR5 249 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 CRB3Q9BUF7 120 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 ZNF471Q9BX82 626 aaPredicted RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 APMAPQ9HDC9 416 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 MTFP1Q9UDX5 166 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 KANTRA0A1W2PQU2 76 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 MNDAP41218 407 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 SRSF5Q13243 272 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 YOD1Q5VVQ6 348 aaPredicted RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 KIAA0895LQ68EN5 471 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 OR4N5Q8IXE1 308 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 SLC37A2Q8TED4 501 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 CDS1Q92903 461 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 MYEF2Q9P2K5 600 aaKnown RBP11.75□□□□□ -0.53
MSH5-204ENST00000375755 PCOLCE2Q9UKZ9 415 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 HEBP2Q9Y5Z4 205 aa11.75□□□□□ -0.53
MSH5-204ENST00000375755 MEX3AA1L020 520 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TMEM200CA6NKL6 621 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 C10orf142B7Z368 130 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 PSMD9O00233 223 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 SMAD9O15198 467 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 SSX5O60225 188 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 SRFP11831 508 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 NPBWR1P48145 328 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 ACTA2P62736 377 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 ACTG2P63267 376 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 POU4F2Q12837 409 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TDGQ13569 410 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 SLC9A5Q14940 896 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 KRT77Q7Z794 578 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 MFSD9Q8NBP5 474 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 OR2L5Q8NG80 312 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 RXFP4Q8TDU9 374 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 ADAMTS15Q8TE58 950 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 MOAP1Q96BY2 351 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 NCDNQ9UBB6 729 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TO15178 435 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 BCL2L11O43521 198 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 OR2T7P0C7T2 308 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 CALCBP10092 127 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 ADRA2CP18825 462 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 CSNK2A2P19784 350 aaPredicted RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 MPIP34949 423 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 NANOS3P60323 173 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 SRSF3P84103 164 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 ILF3Q12906 894 aaKnown RBP eCLIP11.74□□□□□ -0.538e-7■■□□□ 11.6
MSH5-204ENST00000375755 SNTB1Q13884 538 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 DND1Q8IYX4 353 aaKnown RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 BEST3Q8N1M1 668 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 OR2T27Q8NH04 317 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 ACTRT3Q9BYD9 372 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 BCL2L14Q9BZR8 327 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 GAREM1Q9H706 876 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 MEPEQ9NQ76 525 aaPredicted RBP11.74□□□□□ -0.53
MSH5-204ENST00000375755 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 ICAM5Q9UMF0 924 aa11.74□□□□□ -0.53
MSH5-204ENST00000375755 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR6C76A6NM76 312 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 SULT1C2O00338 296 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 TNFP01375 233 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 CBR1P16152 277 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 CENPAP49450 140 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 EEF1A1P68104 462 aaKnown RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 ID2Q02363 134 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 DEFB134Q4QY38 66 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 FAM111BQ6SJ93 734 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RBMS3Q6XE24 437 aaKnown RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RNF113BQ8IZP6 322 aaKnown RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 PHYHIPQ92561 330 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 DVL3Q92997 716 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms