RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 EXO5Q9H790 373 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 APMAPQ9HDC9 416 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NRIP3Q9NQ35 241 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 FOXJ3Q9UPW0 622 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 SCN2AQ99250 2005 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 THEGLP0DJG4 465 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 CD79AP11912 226 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 CTSEP14091 401 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 HPGDP15428 266 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 AKT2P31751 481 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 PMELP40967 661 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 TAF13Q15543 124 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 RPE65Q16518 533 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 PRSS53Q2L4Q9 553 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 PCGF3Q3KNV8 242 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 AKIRIN2Q53H80 203 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 OR52E1Q8NGJ3 308 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 OR4A4PQ8NGN8 299 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 SYNPRQ8TBG9 265 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 SLAMF9Q96A28 289 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 MEGF10Q96KG7 1140 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 RHOVQ96L33 236 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 WDR92Q96MX6 357 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 CHRDQ9H2X0 955 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 TAS2R8Q9NYW2 309 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 SEC16AO15027 2179 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 KLK1P06870 262 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 OMPP47874 163 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 SYPL1Q16563 259 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF614Q8N883 585 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF383Q8NA42 475 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 SMPDL3BQ92485 455 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 F2RL3Q96RI0 385 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
C9orf3-203ENST00000375315 NEUROD4Q9HD90 331 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 TAAR2Q9P1P5 351 aa11.08□□□□□ -0.64
C9orf3-203ENST00000375315 ZC3H12DA2A288 527 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 B4DGG1 531 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ADH7P40394 386 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ANXA11P50995 505 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SLC16A1P53985 500 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OR12D2P58182 307 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF311Q5JNZ3 666 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OR10K2Q6IF99 312 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF620Q6ZNG0 422 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SLCO4C1Q6ZQN7 724 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 LRRTM1Q86UE6 522 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 GLB1L2Q8IW92 636 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 INO80EQ8NBZ0 244 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 STEAP2Q8NFT2 490 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OR4C16Q8NGL9 310 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OR56A3Q8NH54 315 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OR5K2Q8NHB8 316 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 XAGE5Q8WWM1 108 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 LCN9Q8WX39 176 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 S100PBPQ96BU1 408 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SEC61A2Q9H9S3 476 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 TMEM27Q9HBJ8 222 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ZMIZ1Q9ULJ6 1067 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 PLXNA2O75051 1894 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF106Q9H2Y7 1883 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 CDHR4A6H8M9 788 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 PMS2P2O95744 297 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 C1GALT1C1LP0DN25 315 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 PTHLHP12272 177 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 TPT1P13693 172 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 S100A2P29034 98 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 CASRP41180 1078 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 F2RL1P55085 397 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ST3GAL3Q11203 375 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SRSF5Q13243 272 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ATXN7L3Q14CW9 347 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ALG11Q2TAA5 492 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 EDAQ92838 391 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 RSRP1Q9BUV0 290 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MRI1Q9BV20 369 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 EPHX3Q9H6B9 360 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ACKR4Q9NPB9 350 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MEPEQ9NQ76 525 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 IL20RAQ9UHF4 553 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 ACOD1A6NK06 481 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 SLC22A31A6NKX4 558 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 IFITM5A6NNB3 132 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MAN2B1O00754 1011 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 PPIHO43447 177 aaKnown RBP11.07□□□□□ -0.64
C9orf3-203ENST00000375315 TMEM127O75204 238 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 IFNGP01579 166 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 CSF1P09603 554 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 MYF5P13349 255 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 PVRP15151 417 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 DPP4P27487 766 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 GPR4P46093 362 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 TAS2R20P59543 309 aa11.07□□□□□ -0.64
C9orf3-203ENST00000375315 LRRC37A5PQ49AS3 106 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms