RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TCRBP04435 133 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 C1orf140Q5VVS0 124 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GLIPR1L1Q6UWM5 242 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 ZNF836Q6ZNA1 936 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 HPSE2Q8WWQ2 592 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 STACQ99469 402 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 TMEM38AQ9H6F2 299 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GNB4Q9HAV0 340 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 G3V3Y1 287 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 DVL1O14640 695 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 M6PRP20645 277 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 DVL1P1P54792 670 aaPredicted RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 ENTHD1Q8IYW4 607 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 LKAAEAR1Q8TD35 194 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 SLC35A4Q96G79 324 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 ZNF583Q96ND8 569 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 GLIPR2Q9H4G4 154 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 WASH6PQ9NQA3 447 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 KIR2DS1A0A191URI9 304 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 TMEM200CA6NKL6 621 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 BHLHE40O14503 412 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 CHRM2P08172 466 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 KIR2DS4P43632 304 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 GABRA4P48169 554 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 HTR4Q13639 388 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 KIR2DS1Q14954 304 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 MLF2Q15773 248 aaPredicted RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 AVPI1Q5T686 147 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 H1FNTQ75WM6 255 aaPredicted RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 SIAH3Q8IW03 269 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 OR52I1Q8NGK6 324 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 PIGTQ969N2 578 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 RNF170Q96K19 258 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 CNIH1O95406 144 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 PMPCAQ10713 525 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 CISD2Q8N5K1 135 aaKnown RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 TMEM217Q8N7C4 229 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 OR2T11Q8NH01 316 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 GAREM1Q9H706 876 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 LTN1O94822 1766 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 A0A1B0GX78 115 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 TACR1P25103 407 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 PTBP1P26599 531 aaKnown RBP eCLIP10.63□□□□□ -0.713e-7■■■■□ 20.9
VCL-202ENST00000372755 TESK1Q15569 626 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 FXNQ16595 210 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 ARHGAP11BQ3KRB8 267 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 NKAIN2Q5VXU1 208 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 MFSD12Q6NUT3 480 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 DOK3Q7L591 496 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 MARCH3Q86UD3 253 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 TEX19Q8NA77 164 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 SEMA6DQ8NFY4 1073 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 YIPF5Q969M3 257 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 C20orf85Q9H1P6 137 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 OPA3Q9H6K4 179 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 BCO1Q9HAY6 547 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 LYRM4Q9HD34 91 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 SLC22A11Q9NSA0 550 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 THAP10Q9P2Z0 257 aaPredicted RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 NDRG4Q9ULP0 352 aaKnown RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 FAPQ12884 760 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 SEMA3BQ13214 749 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 LFNGQ8NES3 379 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 NXPE3Q969Y0 559 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 DHCR7Q9UBM7 475 aaKnown RBP10.63□□□□□ -0.71
VCL-202ENST00000372755 OSGIN2Q9Y236 505 aa10.63□□□□□ -0.71
VCL-202ENST00000372755 ATP1B1P05026 303 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 APOBEC1P41238 236 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 NOVP48745 357 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 CCL11P51671 97 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 GLYATL3Q5SZD4 288 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 DCXRQ7Z4W1 244 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 KDF1Q8NAX2 398 aaPredicted RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 SYT11Q9BT88 431 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 KIR3DX1Q9H7L2 352 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 M0QYG6 137 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 SLC16A6O15403 523 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ACHEP22303 614 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ADIRFQ15847 76 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 YOD1Q5VVQ6 348 aaPredicted RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 OR51A4Q8NGJ6 313 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 OR10J5Q8NHC4 309 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 TMEM43Q9BTV4 400 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 FAM208AQ9UK61 1670 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 ADAM10O14672 748 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 GLAP06280 429 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ADPRMQ3LIE5 342 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ABHD17CQ6PCB6 329 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 Q6ZRG5 221 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 MAML2Q8IZL2 1156 aaPredicted RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 UTP4Q969X6 686 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms