RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ADGRG7Q96K78 797 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 ADAD1Q96M93 576 aaKnown RBP23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 RBP7Q96R05 134 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 DCUN1D5Q9BTE7 237 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 EMC6Q9BV81 110 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 MARCH7Q9H992 704 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 IGHG1P01857 330 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 ENPP1P22413 925 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 VBP1P61758 197 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 GLO1Q04760 184 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 KLBQ86Z14 1044 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 INTS14Q96SY0 518 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 MRPL13Q9BYD1 178 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 OR51E2Q9H255 320 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 ACKR4Q9NPB9 350 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 TRIM36Q9NQ86 728 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 ZNF670-ZNF695F2Z2N8 137 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 H0YC42 278 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 CELA3AP09093 270 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 KLK2P20151 261 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SUCLG1P53597 346 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC10A1Q14973 349 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SPCS2Q15005 226 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 GDPGP1Q6ZNW5 385 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SYS1Q8N2H4 156 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 FAM109AQ8N4B1 249 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SNX33Q8WV41 574 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SMAD5Q99717 465 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SF3B5Q9BWJ5 86 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 SRXN1Q9BYN0 137 aa23.47■■□□□ 1.35
ATPAF1-202ENST00000371937 CELSR3Q9NYQ7 3312 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 TRAV17A0A0B4J275 112 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC35F4A4IF30 521 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 ZNF726A6NNF4 738 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 HLA-DQA2P01906 255 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 THEM4Q5T1C6 240 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 OR10D3Q8NH80 312 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 FNDC8Q8TC99 324 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 C4orf36Q96KX1 117 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 UCN2Q96RP3 112 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 CHCHD6Q9BRQ6 235 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 CXorf56Q9H5V9 222 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 KLHL13Q9P2N7 655 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 TMEM14AQ9Y6G1 99 aa23.46■■□□□ 1.35
ATPAF1-202ENST00000371937 LOC100506127A0A0U1RQW1 187 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 TVP23AA6NH52 213 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 NPIPA2E9PIF3 369 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 NPIPA3F8WFD2 350 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 J3QLW9 94 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 LALBAP00709 142 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 ZNF19P17023 458 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 EIF1AXP47813 144 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CLRN1P58418 232 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 TAS2R43P59537 309 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 NCS1P62166 190 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 GPR50Q13585 617 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 SSX6Q7RTT6 188 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 WDR76Q9H967 626 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 STUB1Q9UNE7 303 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 SPTBN2O15020 2390 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 IGHV3-15A0A0B4J1V0 119 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 KHDRBS3O75525 346 aaKnown RBP23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 SLC17A1Q14916 467 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CDONQ4KMG0 1287 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CREB3L2Q70SY1 520 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 VASH1Q7L8A9 365 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CDC20BQ86Y33 519 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 EGFL6Q8IUX8 553 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 WDFY1Q8IWB7 410 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 OR9K2Q8NGE7 335 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CPNE4Q96A23 557 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 SLC6A15Q9H2J7 730 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 COPS3Q9UNS2 423 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 CSAG2Q9Y5P2 127 aa23.45■■□□□ 1.34
ATPAF1-202ENST00000371937 ASPMQ8IZT6 3477 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 SMAD9O15198 467 aaKnown RBP23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 CXCL13O43927 109 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 PGA4P0DJD7 388 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 PGA3P0DJD8 388 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 ZNF182P17025 639 aaPredicted RBP23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 LHX2P50458 406 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 OR12D2P58182 307 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 CAMK2DQ13557 499 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 VASNQ6EMK4 673 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 RFLNBQ8N5W9 214 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 NOXO1Q8NFA2 376 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 OR6N2Q8NGY6 317 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 SSUH2Q9Y2M2 353 aa23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 COA3Q9Y2R0 106 aaPredicted RBP23.44■■□□□ 1.34
ATPAF1-202ENST00000371937 NR2C1P13056 603 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 CELP19835 753 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 GABRA5P31644 462 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 CLDN15P56746 228 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 CLDN17P56750 224 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 RPS3AP61247 264 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 ETFDHQ16134 617 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 BCL2A1Q16548 175 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 LAMP5Q9UJQ1 280 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 ZMIZ1Q9ULJ6 1067 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 PNMA8CA0A1B0GUJ8 204 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms