RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ITGA2P17301 1181 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 PCGF2P35227 344 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 RBBP4Q09028 425 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 NFYCQ13952 458 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 GKAP1Q5VSY0 366 aaPredicted RBP11.27□□□□□ -0.61
RPF1-201ENST00000370654 TTC33Q6PID6 262 aaPredicted RBP11.27□□□□□ -0.61
RPF1-201ENST00000370654 RINLQ6ZS11 566 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 PIWIL3Q7Z3Z3 882 aaKnown RBP11.27□□□□□ -0.61
RPF1-201ENST00000370654 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 OR4K5Q8NGD3 323 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 ZNF347Q96SE7 839 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 NANSQ9NR45 359 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 ZNF275Q9NSD4 429 aaPredicted RBP11.27□□□□□ -0.61
RPF1-201ENST00000370654 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
RPF1-201ENST00000370654 FBXO9Q9UK97 447 aaPredicted RBP11.27□□□□□ -0.61
RPF1-201ENST00000370654 IGKV1D-43A0A0B4J1Z2 117 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 TRAPPC13A5PLN9 417 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 RP2O75695 350 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 OR6A2O95222 327 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 FUT1P19526 365 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 HNF1AP20823 631 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 RBMXP38159 391 aaKnown RBP11.26□□□□□ -0.61
RPF1-201ENST00000370654 UGT2B15P54855 530 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 RABL3Q5HYI8 236 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 MOSPD2Q8NHP6 518 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 MCHR2Q969V1 340 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 ZNF566Q969W8 418 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 SLC25A44Q96H78 314 aaPredicted RBP11.26□□□□□ -0.61
RPF1-201ENST00000370654 PCDHAC1Q9H158 963 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 NPHS2Q9NP85 383 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 C20orf141Q9NUB4 165 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
RPF1-201ENST00000370654 BLOC1S5-TXNDC5H3BN57 136 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 FXYD1O00168 92 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 ANGPT2O15123 496 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 OR8G3PP0DMU2 310 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 UMPSP11172 480 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 CDAP32320 146 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 AQP2P41181 271 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 GPR6P46095 362 aaPredicted RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 DVL1P1P54792 670 aaPredicted RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 LMO4P61968 165 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 GALK2Q01415 458 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
RPF1-201ENST00000370654 HIST3H3Q16695 136 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 VMACQ2NL98 169 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 NANOGP8Q6NSW7 305 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 SYT14Q8NB59 555 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 CPEB3Q8NE35 698 aaKnown RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 RDH5Q92781 318 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 MRPL13Q9BYD1 178 aaKnown RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 DENND2DQ9H6A0 471 aaPredicted RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 NANOGQ9H9S0 305 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 INTS9Q9NV88 658 aaKnown RBP11.25□□□□□ -0.61
RPF1-201ENST00000370654 TAAR3PQ9P1P4 343 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 SLC7A8Q9UHI5 535 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 CACNG2Q9Y698 323 aa11.25□□□□□ -0.61
RPF1-201ENST00000370654 A0A1W2PPW3 197 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 CDC14BO60729 498 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 TRMUO75648 421 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 VENTXO95231 258 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 SLC2A10O95528 541 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 BCL10O95999 233 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 AVPP01185 164 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 MMP7P09237 267 aaPredicted RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 ACHEP22303 614 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 SRP14P37108 136 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 GLO1Q04760 184 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 PIN1Q13526 163 aaPredicted RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 AVPI1Q5T686 147 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 RGS7BPQ6MZT1 257 aaPredicted RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 CALHM3Q86XJ0 350 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 LRRC18Q8N456 261 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 CLDN22Q8N7P3 220 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 ASB10Q8WXI3 467 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 NMD3Q96D46 503 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 MAGEB18Q96M61 343 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 SEPHS2Q99611 448 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 RABEP2Q9H5N1 569 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 RNF121Q9H920 327 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
RPF1-201ENST00000370654 TRIM33Q9UPN9 1127 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
RPF1-201ENST00000370654 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms