RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FBXO34Q9NWN3 711 aa4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 NTMQ9P121 344 aa4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 FARSAQ9Y285 508 aaKnown RBP4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 EXOGQ9Y2C4 368 aaKnown RBP4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM184BQ9Y519 407 aaPredicted RBP4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 ALG5Q9Y673 324 aa4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 SCN3AQ9NY46 2000 aa4.84□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A1W2PS29 197 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 PRSS37A4D1T9 235 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 FOXS1O43638 330 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 GCM2O75603 506 aaPredicted RBP4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 IFNA21P01568 189 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 S100A9P06702 114 aaKnown RBP4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CYC1P08574 325 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CD3GP09693 182 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CLEC2LP0C7M8 214 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 SRMP19623 302 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 VAMP1P23763 118 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CLDN17P56750 224 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 DEFA5Q01523 94 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 TFF2Q03403 129 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 LTBQ06643 244 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 SIGLEC14Q08ET2 396 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 MELKQ14680 651 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CDK5R1Q15078 307 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 EBPQ15125 230 aaKnown RBP4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 POU4F3Q15319 338 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CEBPEQ15744 281 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 AADACL4Q5VUY2 407 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 METTL11BQ5VVY1 283 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 GLB1L2Q8IW92 636 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 NKAIN3Q8N8D7 197 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 OR8S1Q8NH09 359 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 MFSD8Q8NHS3 518 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 NUBPLQ8TB37 319 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 ZBTB8AQ96BR9 441 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM71F1Q96KD3 344 aaPredicted RBP4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 LMF1Q96S06 567 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 CHRNA10Q9GZZ6 450 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 C20orf141Q9NUB4 165 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 NOP16Q9Y3C1 178 aaKnown RBP4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 HDGFL3Q9Y3E1 203 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 LOXL2Q9Y4K0 774 aa4.84□□□□□ -1.64
SMNDC1-202ENST00000369603 C5orf51A6NDU8 294 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 F5H5K5 113 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2J2O76002 312 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 NCR1O76036 304 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OPN1LWP04000 364 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LCATP04180 440 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 IFNGR1P15260 489 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ENPP1P22413 925 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FABP5Q01469 135 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 DUSP2Q05923 314 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 EIF3IQ13347 325 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CAMK2DQ13557 499 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PLEKHN1Q494U1 663 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF658BQ4V348 819 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AKIRIN2Q53H80 203 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 THEM4Q5T1C6 240 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC25A24Q6NUK1 477 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FCRLAQ7L513 359 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AAED1Q7RTV5 226 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 INO80EQ8NBZ0 244 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 C8orf44Q96CB5 159 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 DCBLD2Q96PD2 775 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ENKD1Q9H0I2 346 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 KCNG2Q9UJ96 466 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CIB4A0PJX0 185 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 VSTM5A8MXK1 200 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SMLR1H3BR10 107 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RAD1O60671 282 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RAD51DO75771 328 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GUSBP08236 651 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FBXO45P0C2W1 286 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AKAIN1P0CW23 69 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MYF5P13349 255 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SNRPBP14678 240 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 HOXB9P17482 250 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 APEX1P27695 318 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AP2S1P53680 142 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CARD18P57730 90 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GABREP78334 506 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF117Q03924 483 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SRYQ05066 204 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ISXQ2M1V0 245 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PCGF3Q3KNV8 242 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CHRFAM7AQ494W8 412 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GLYR1Q49A26 553 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CDNFQ49AH0 187 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RTL6Q6ICC9 239 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TMPPEQ6ZT21 453 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ANKRD37Q7Z713 158 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF679Q8IYX0 411 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SPERTQ8NA61 448 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GALNT11Q8NCW6 608 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 THAP6Q8TBB0 222 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FBLIM1Q8WUP2 373 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PCNPQ8WW12 178 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms