RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 LYVE1Q9Y5Y7 322 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 IGKV1D-43A0A0B4J1Z2 117 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 DANCRP0C864 163 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 PAX7P23759 505 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 CHRNB3Q05901 458 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 B3GLCTQ6Y288 498 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 THSD4Q6ZMP0 1018 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 FAM122BQ7Z309 247 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 ADGRG5Q8IZF4 528 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 CLDN22Q8N7P3 220 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 FAM169BQ8N8A8 192 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 OR4C15Q8NGM1 316 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 FBXW5Q969U6 566 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 RSRC1Q96IZ7 334 aaKnown RBP19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 LRGUKQ96M69 825 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 SLC38A2Q96QD8 506 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 SEC61A2Q9H9S3 476 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 TMEM38BQ9NVV0 291 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 VNN3Q9NY84 501 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 STX18Q9P2W9 335 aaKnown RBP19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 AURKCQ9UQB9 309 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 ADAM18Q9Y3Q7 739 aa19.54■□□□□ 0.72
ECHDC1-203ENST00000368291 USF3Q68DE3 2245 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 AQP12BA6NM10 295 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 KRT36O76013 467 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CD14P08571 375 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CBR1P16152 277 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 ACVR1BP36896 505 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 ERVK-25P63136 954 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 PGGHGQ32M88 737 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 C3orf36Q3SXR2 165 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 FAM98BQ52LJ0 330 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 SLC22A25Q6T423 547 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 AQP12AQ8IXF9 295 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CCDC36Q8IYA8 594 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CANT1Q8WVQ1 401 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 HTRA1Q92743 480 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 POP5Q969H6 163 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 RADILQ96JH8 1075 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF75AQ96N20 296 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CCL19Q99731 98 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 KRCC1Q9NPI7 259 aaPredicted RBP19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 CISD1Q9NZ45 108 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 POMPQ9Y244 141 aa19.53■□□□□ 0.72
ECHDC1-203ENST00000368291 UNC119BA6NIH7 251 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 E7EQL1 145 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 OR10H3O60404 316 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 NDUFB2O95178 105 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 SLC2A10O95528 541 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 HLA-HP01893 362 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 CELA3BP08861 270 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 CDH11P55287 796 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 FMODQ06828 376 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 PPP1R8Q12972 351 aaKnown RBP19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 C10orf128Q5T292 105 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 C1orf94Q6P1W5 598 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 SLC25A47Q6Q0C1 308 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 MDP1Q86V88 176 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 SKA3Q8IX90 412 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 ARIH2OSQ8N7S6 290 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 FGFBP3Q8TAT2 258 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 PIGTQ969N2 578 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 Q96M85 177 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 GPX7Q96SL4 187 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 BEX4Q9NWD9 120 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 IL20RAQ9UHF4 553 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 TMCC3Q9ULS5 477 aa19.52■□□□□ 0.72
ECHDC1-203ENST00000368291 RTTNQ86VV8 2226 aa19.52■□□□□ 0.71
ECHDC1-203ENST00000368291 CELSR1Q9NYQ6 3014 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 TNFRSF11BO00300 401 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SOD3P08294 240 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 CECR9P0C854 216 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 RAP2AP10114 183 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 RPL4P36578 427 aaKnown RBP19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 GSSP48637 474 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 FAM205BPQ63HN1 556 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 OR2T5Q6IEZ7 315 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 PGBD2Q6P3X8 592 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SPNS3Q6ZMD2 512 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SLC22A24Q8N4F4 322 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 OR2T29Q8NH02 315 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SMAP2Q8WU79 429 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 ALG12Q9BV10 488 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 TRIM15Q9C019 465 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SMURF2Q9HAU4 748 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 NRIP3Q9NQ35 241 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 SLC7A8Q9UHI5 535 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 MOKQ9UQ07 419 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 UGT2A1Q9Y4X1 527 aa19.51■□□□□ 0.71
ECHDC1-203ENST00000368291 ATP6V1G2-DDX39BF2Z307 99 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 STAMBPO95630 424 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 FPR3P25089 353 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 CAPZA2P47755 286 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 IDH3GP51553 393 aaPredicted RBP19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 NAAAQ02083 359 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 CD47Q08722 323 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 FLOT2Q14254 428 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 MESTQ5EB52 335 aa19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 ZNF770Q6IQ21 691 aaPredicted RBP19.5■□□□□ 0.71
ECHDC1-203ENST00000368291 OR9Q2Q8NGE9 314 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms