RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
PRKN-205ENST00000366897 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
PRKN-205ENST00000366897 CDV3Q9UKY7 258 aaKnown RBP12.34□□□□□ -0.43
PRKN-205ENST00000366897 COLEC10Q9Y6Z7 277 aa12.34□□□□□ -0.43
PRKN-205ENST00000366897 TBC1D3DA0A087WVF3 549 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TBC1D3IA0A087WXS9 549 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TBC1D3LB9A6J9 549 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 AKR7A3O95154 331 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 KAT7O95251 611 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 CSTAP01040 98 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TBC1D3HP0C7X1 549 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 FAUP35544 74 aaKnown RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 CTXN1P60606 82 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TBC1D3CQ6IPX1 549 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 DPY19L2P2Q6ZN68 376 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 JAZF1Q86VZ6 243 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 ZNF227Q86WZ6 799 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 NAXDQ8IW45 347 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TBC1D3Q8IZP1 549 aaPredicted RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 GALNT16Q8N428 558 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 RCBTB1Q8NDN9 531 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TSEN15Q8WW01 171 aaKnown RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 STEAP1Q9UHE8 339 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 SLC22A13Q9Y226 551 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 FARSAQ9Y285 508 aaKnown RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 GPR31O00270 319 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 ALOX12BO75342 701 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 CCKBRP32239 447 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 STARP49675 285 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 ARHGAP40Q5TG30 622 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TMEM185AQ8NFB2 350 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 OR6N1Q8NGY5 312 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 FLVCR1-AS1Q8TAF5 88 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 NT5CQ8TCD5 201 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 TM4SF19Q96DZ7 209 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 HPF1Q9NWY4 346 aa12.33□□□□□ -0.44
PRKN-205ENST00000366897 THAP10Q9P2Z0 257 aaPredicted RBP12.33□□□□□ -0.44
PRKN-205ENST00000366897 PRSS38A1L453 326 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR4C45A6NMZ5 311 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 C17orf51A8MQB3 221 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 FAM25EA8MYX2 175 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OIP5O43482 229 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ZNF28P17035 718 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 CALCRP30988 508 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 MAP3K8P41279 467 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 CENPAP49450 140 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 NR0B2Q15466 257 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 TAF13Q15543 124 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 EXOSC6Q5RKV6 272 aaKnown RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 BEST3Q8N1M1 668 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PRSS35Q8N3Z0 413 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 CLRN3Q8NCR9 226 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR9A4Q8NGU2 314 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR10Z1Q8NGY1 313 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 ZNF524Q96C55 264 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ZNF471Q9BX82 626 aaPredicted RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 KIR3DX1Q9H7L2 352 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PLCL2Q9UPR0 1127 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PRR19A6NJB7 356 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 NKX2-2O95096 273 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 AKAIN1P0CW23 69 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 RBM34P42696 430 aaKnown RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 C2orf76Q3KRA6 126 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 LINC00114Q6XXX2 140 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ABHD13Q7L211 337 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 STEAP2Q8NFT2 490 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR6K3Q8NGY3 331 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 GLS2Q9UI32 602 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 IGKV1D-42A0A075B6H8 117 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 A0A087WV62 115 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 ABHD16AO95870 558 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR4E1P0C645 316 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PRSS3P35030 304 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 KRT77Q7Z794 578 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 RERGQ96A58 199 aaPredicted RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 OR2M4Q96R27 311 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms