RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 HMGN2P46Q86SG4 172 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 RBM15BQ8NDT2 890 aaKnown RBP6.91□□□□□ -1.3
YBX3-204ENST00000366290 FAM83FQ8NEG4 500 aaPredicted RBP6.91□□□□□ -1.3
YBX3-204ENST00000366290 OR5M9Q8NGP3 310 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 OR10A6Q8NH74 314 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 ZPLD1Q8TCW7 415 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 CA5BP1Q8WTZ4 195 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 TMEM19Q96HH6 336 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 ZNF583Q96ND8 569 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 TRNT1Q96Q11 434 aaKnown RBP6.91□□□□□ -1.3
YBX3-204ENST00000366290 KLHDC3Q9BQ90 382 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 UGT2B28Q9BY64 529 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 MUC13Q9H3R2 512 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 TMEM38AQ9H6F2 299 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 EXD2Q9NVH0 621 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 GID8Q9NWU2 228 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.91□□□□□ -1.3
YBX3-204ENST00000366290 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 P2RX2Q9UBL9 471 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 FBXL2Q9UKC9 423 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 FAM96BQ9Y3D0 163 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 KIAA1549Q9HCM3 1950 aa6.91□□□□□ -1.3
YBX3-204ENST00000366290 MTORP42345 2549 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 C15orf38-AP3S2A0A0A6YYH1 394 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CLDN24A6NM45 220 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 NPIPB11E5RHQ5 1161 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 C19orf84I3L1E1 186 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 PTP4A3O75365 173 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 STX11O75558 287 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 TIPRLO75663 272 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 TRAPPC6AO75865 159 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 TFP02787 698 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 NR2F1P10589 423 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CALB2P22676 271 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CEACAM8P31997 349 aaPredicted RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 PCGF2P35227 344 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 ATP12AP54707 1039 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CDH12P55289 794 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CDK6Q00534 326 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 FOXD4Q12950 439 aaPredicted RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 BNIP1Q12981 228 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 GANABQ14697 944 aaKnown RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 ZNF141Q15928 474 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 BCL2A1Q16548 175 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 SLC25A35Q3KQZ1 300 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 GLYR1Q49A26 553 aaPredicted RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 GPAT3Q53EU6 434 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 KLHL26Q53HC5 615 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 EIPR1Q53HC9 387 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 DCST1Q5T197 706 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 ATAD3BQ5T9A4 648 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 PXDC1Q5TGL8 231 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 NSUN5P2Q63ZY6 315 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 C16orf62Q7Z3J2 963 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 MARCH3Q86UD3 253 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 LACC1Q8IV20 430 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 MCEMP1Q8IX19 187 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 PGAM4Q8N0Y7 254 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 GJC3Q8NFK1 279 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 ABTB1Q969K4 478 aaPredicted RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 RPL36ALQ969Q0 106 aaKnown RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 ZNF524Q96C55 264 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 ZC3HAV1LQ96H79 300 aaKnown RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 HOPXQ9BPY8 73 aaPredicted RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 THUMPD3Q9BV44 507 aaKnown RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 POLDIP3Q9BY77 421 aaKnown RBP6.9□□□□□ -1.3
YBX3-204ENST00000366290 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 EXO5Q9H790 373 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 CALHM2Q9HA72 323 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 SCPEP1Q9HB40 452 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 BCL2L10Q9HD36 194 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 POLE3Q9NRF9 147 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 SDHAF3Q9NRP4 125 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 UBQLN4Q9NRR5 601 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 NDRG3Q9UGV2 375 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 SLC6A5Q9Y345 797 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 WDR45Q9Y484 360 aa6.9□□□□□ -1.3
YBX3-204ENST00000366290 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.31
YBX3-204ENST00000366290 A0A1W2PQD3 144 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 PRORSD1PA6NEY8 169 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 FAM220BPB1ANY3 271 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 SCO2O43819 266 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 DOK2O60496 412 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 PGM3O95394 542 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 ZNF708P17019 499 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 ATP6V1C1P21283 382 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 DPP4P27487 766 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 DCTDP32321 178 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 GCKP35557 465 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 GSK3BP49841 420 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 LHX2P50458 406 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 CRISP3P54108 245 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 DSCR4P56555 118 aaPredicted RBP6.89□□□□□ -1.31
YBX3-204ENST00000366290 CLDN18P56856 261 aa6.89□□□□□ -1.31
YBX3-204ENST00000366290 LIPEQ05469 1076 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms