RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 J3QLW9 94 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC25A12O75746 678 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC34A2O95436 690 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF19P17023 458 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 PRKCAP17252 672 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 FUT1P19526 365 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 WT1P19544 449 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 GALK2Q01415 458 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 INPP5JQ15735 1006 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 DCAF10Q5QP82 559 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC22A10Q63ZE4 541 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 TMEM81Q6P7N7 255 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 RTL4Q6ZR62 310 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 ASB18Q6ZVZ8 466 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 ST8SIA1Q92185 356 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 SMPDL3BQ92485 455 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 TIMP4Q99727 224 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 MED11Q9P086 117 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 ING4Q9UNL4 249 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 CACNG2Q9Y698 323 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 CHCHD2Q9Y6H1 151 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 FREM3P0C091 2139 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 FZD7O75084 574 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 IGF2P01344 180 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 EIF4EP06730 217 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 NOS3P29474 1203 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC6A6P31641 620 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 THBS2P35442 1172 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF41P51814 821 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 AIMP2Q13155 320 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ACSM3Q53FZ2 586 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 PLA1AQ53H76 456 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ACER2Q5QJU3 275 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 POMZP3Q6PJE2 187 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 PXKQ7Z7A4 578 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 NR2C2APQ86WQ0 139 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 CLEC1AQ8NC01 280 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 OR13C2Q8NGS9 318 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ENKD1Q9H0I2 346 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 MED28Q9H204 178 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 DPAGT1Q9H3H5 408 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ABI3Q9P2A4 366 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 SPTBN4Q9H254 2564 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 NOTOA8MTQ0 251 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 PTP4A3O75365 173 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 PEPDP12955 493 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 SPINK2P20155 84 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 RAB3BP20337 219 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 RTP5Q14D33 572 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ARHGAP11AQ6P4F7 1023 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 NPAS1Q99742 590 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 PTGES2Q9H7Z7 377 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ADGRL4Q9HBW9 690 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
SQSTM1-201ENST00000360718 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 TRAV1-2A0A0B4J238 106 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 DVL2O14641 736 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ARL6IP5O75915 188 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 MRPL3P09001 348 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ITGA3P26006 1051 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ABHD17BQ5VST6 288 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 PRAMEF20Q5VT98 475 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 BAIAP2L2Q6UXY1 529 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 OR4K17Q8NGC6 315 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 OR51A7Q8NH64 312 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 PAQR8Q8TEZ7 354 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ANKRD10Q9NXR5 420 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 TMED7Q9Y3B3 224 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF337Q9Y3M9 751 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 TRABD2BA6NFA1 517 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 E9PI62 339 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 SC5DO75845 299 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 OR7A10O76100 309 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 PAHP00439 452 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC2A5P22732 501 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 HTR2BP41595 481 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 GBX2P52951 348 aaPredicted RBP11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF85Q03923 595 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 CRMP1Q14194 572 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 HSD17B12Q53GQ0 312 aa11.85□□□□□ -0.51
SQSTM1-201ENST00000360718 KRT74Q7RTS7 529 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms