RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TMEM81Q6P7N7 255 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF322Q6U7Q0 402 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 IL20RBQ6UXL0 311 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 AP3S1Q92572 193 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 SMAD5Q99717 465 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 OR51V1Q9H2C8 321 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 NSG1A0A0A6YYJ2 146 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 MCIDASD6RGH6 385 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 ERP29P30040 261 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 RPL4P36578 427 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 CAPZA2P47755 286 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 GZMKP49863 264 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 P2RX1P51575 399 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 RPS7P62081 194 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 CBFBQ13951 182 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 ASB18Q6ZVZ8 466 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 OR52E2Q8NGJ4 325 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 OR5L2Q8NGL0 311 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 SPRYD4Q8WW59 207 aaPredicted RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 MMP25Q9NPA2 562 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 NANSQ9NR45 359 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 P4HTMQ9NXG6 502 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 FBXL4Q9UKA2 621 aa12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 MRPS7Q9Y2R9 242 aaKnown RBP12.52□□□□□ -0.4
CSNK1E-201ENST00000359867 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 IMPA2O14732 288 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 SBK2P0C263 348 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 PRKAR1AP10644 381 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 HIST1H1CP16403 213 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 WT1P19544 449 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 ITPKBP27987 946 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 HLA-DMAP28067 261 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 EGR4Q05215 589 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 FCRLBQ6BAA4 426 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 CD200R1LQ6Q8B3 271 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 FAM98AQ8NCA5 519 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 OR8H1Q8NGG4 311 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 NEIL3Q8TAT5 605 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 IMMP1LQ96LU5 166 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 ZNF700Q9H0M5 742 aa12.52□□□□□ -0.41
CSNK1E-201ENST00000359867 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 GABRPO00591 440 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 SEC14L5O43304 696 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ASAH2BP0C7U1 165 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 GAAP10253 952 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 GP1BBP13224 206 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 CXCR1P25024 350 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 AGFG1P52594 562 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ACTC1P68032 377 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ACTA1P68133 377 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 LGALS3BPQ08380 585 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 CREB3L2Q70SY1 520 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 CYB561A3Q8NBI2 242 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 OR52H1Q8NGJ2 320 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 TBX5Q99593 518 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 RNF32Q9H0A6 362 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ASB6Q9NWX5 421 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ZC3H12DA2A288 527 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 IGHEP01854 428 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ARSBP15848 533 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 GALP22466 123 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 EVX1P49640 407 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 SLC16A1P53985 500 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 CLN3Q13286 438 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 TNK1Q13470 666 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 SLC35D3Q5M8T2 416 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 NDUFAF7Q7L592 441 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 KLBQ86Z14 1044 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 OR4K13Q8NH42 304 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 SLC22A8Q8TCC7 542 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 DDOQ99489 341 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ALG8Q9BVK2 526 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 HDHD2Q9H0R4 259 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 FKRPQ9H9S5 495 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 BABAM2Q9NXR7 383 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 ACACAQ13085 2346 aa12.51□□□□□ -0.41
CSNK1E-201ENST00000359867 LANCL1O43813 399 aa12.5□□□□□ -0.41
CSNK1E-201ENST00000359867 RIN1Q13671 783 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms