RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 AHCYL1O43865 530 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 MRPL3P09001 348 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 CELA3AP09093 270 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF43P17038 809 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 PYCR1P32322 319 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 CENPAP49450 140 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ETV1P50549 477 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 BLVRAP53004 296 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 WNT4P56705 351 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 CLDN20P56880 219 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 RAC3P60763 192 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 H3F3AP84243 136 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF169Q14929 603 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 SLC10A1Q14973 349 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 POU4F3Q15319 338 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 SPHARQ15513 63 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 EEF1A1P5Q5VTE0 462 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 GPR107Q5VW38 600 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 B3GLCTQ6Y288 498 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 GPAT4Q86UL3 456 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 PM20D2Q8IYS1 436 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 MEIOBQ8N635 442 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 OR10H4Q8NGA5 316 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF420Q8TAQ5 688 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 EXTL1Q92935 676 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ADGRG7Q96K78 797 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 COG8Q96MW5 612 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ACKR4Q9NPB9 350 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 TIGARQ9NQ88 270 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 MED29Q9NX70 200 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 ERVK13-1Q9NX77 482 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 CLEC2DQ9UHP7 191 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 CSAG2Q9Y5P2 127 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 DAPL1A0PJW8 107 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF814B7Z6K7 855 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 J3QRE1 110 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ACTL6AO96019 429 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 LIMS3P0CW19 117 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 LIMS4P0CW20 117 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ENPP1P22413 925 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 CRABP1P29762 137 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 EIF1AXP47813 144 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 STARP49675 285 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 BIDP55957 195 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 CARD18P57730 90 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 RPS3AP61247 264 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ARMCX4Q5H9R4 360 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 LINC01590Q5TEZ4 76 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 TRILQ7L0X0 811 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 SLC35F2Q8IXU6 374 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 NOXO1Q8NFA2 376 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 OR52N1Q8NH53 320 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 CPNE4Q96A23 557 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 YIPF6Q96EC8 236 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 MRPL48Q96GC5 212 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ADAD1Q96M93 576 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 OR5M11Q96RB7 305 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 MGLLQ99685 303 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 NUAK2Q9H093 628 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 EXO5Q9H790 373 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 SRA1Q9HD15 236 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 TUBD1Q9UJT1 453 aa12.35□□□□□ -0.43
PDLIM5-203ENST00000359265 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 NPIPA2E9PIF3 369 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 NPIPA3F8WFD2 350 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 TFECO14948 347 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 SMAD9O15198 467 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 CXCL13O43927 109 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 RAMP1O60894 148 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 IGHG1P01857 330 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 OR2T7P0C7T2 308 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 NR2C1P13056 603 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF708P17019 499 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 ZNF24P17028 368 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 NAA10P41227 235 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 LHX2P50458 406 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 SUCLG1P53597 346 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 TMBIM6P55061 237 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 HSF2Q03933 536 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 MLLT11Q13015 90 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 INAQ16352 499 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 BCL2A1Q16548 175 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 TMPRSS11AQ6ZMR5 421 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 LHFPL3Q86UP9 236 aa12.34□□□□□ -0.43
PDLIM5-203ENST00000359265 ZBTB46Q86UZ6 589 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms