RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 UBE2G2P60604 165 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 KANSL1Q7Z3B3 1105 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 BCDIN3DQ7Z5W3 292 aaKnown RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 OR8U1Q8NH10 309 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 LYSMD1Q96S90 227 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 DUSP21Q9H596 190 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 CDC14CA4D256 554 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 TRAF3IP2O43734 574 aaPredicted RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 ARSAP15289 507 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 NKX2-1P43699 371 aaPredicted RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 GP2P55259 537 aaKnown RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 CLDN2P57739 230 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 TMEM71Q6P5X7 295 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 CCNL2Q96S94 520 aaPredicted RBP13.41□□□□□ -0.26
NUP98-203ENST00000359171 NKX2-4Q9H2Z4 354 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 GLIPR2Q9H4G4 154 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 ZNF724A8MTY0 619 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 XKR7Q5GH72 579 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 COX20Q5RI15 118 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 MFSD12Q6NUT3 480 aa13.41□□□□□ -0.26
NUP98-203ENST00000359171 EIF1BO60739 113 aaKnown RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 RGS11O94810 467 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 MTHFD2P13995 350 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 OR5M10Q6IEU7 315 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 SLC48A1Q6P1K1 146 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 PDGFBP01127 241 aaPredicted RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 LRRC18Q8N456 261 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 SEMA6DQ8NFY4 1073 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 LRFN5Q96NI6 719 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 ERVMER34-1Q9H9K5 563 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 MED9Q9NWA0 146 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 PRAMEF4O60810 478 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 ARG2P78540 354 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 TRNP1Q6NT89 227 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 PLPP7Q8NBV4 271 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 NSG1A0A0A6YYJ2 146 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 A6NL46 340 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 ZNF891A8MT65 544 aaPredicted RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 UMAD1C9J7I0 102 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 MT-ATP6P00846 226 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 BIDP55957 195 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 ZP2Q05996 745 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 NLRC3Q7RTR2 1065 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 SLC39A11Q8N1S5 342 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 GPR78Q96P69 363 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 DYNLRB1Q9NP97 96 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
NUP98-203ENST00000359171 CHRNA9Q9UGM1 479 aa13.4□□□□□ -0.26
NUP98-203ENST00000359171 TUSC2O75896 110 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 GZMKP49863 264 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 OR52I2Q8NH67 350 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 INTS12Q96CB8 462 aaKnown RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 TEAD3Q99594 435 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 CDCA3Q99618 268 aaPredicted RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 BCO1Q9HAY6 547 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 CBY1Q9Y3M2 126 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 DUSP1P28562 367 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 RACK1P63244 317 aaKnown RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 OR1M1Q8NGA1 313 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 ASB13Q8WXK3 278 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 FAM155AB1AL88 458 aaPredicted RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 GABRB1P18505 474 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 CD80P33681 288 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 C17orf67Q0P5P2 114 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 GABARAPL3Q9BY60 117 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 SPACA1Q9HBV2 294 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 SLC5A10A0PJK1 596 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 GPX5O75715 221 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 CATSPERDQ86XM0 798 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 ANGPTL5Q86XS5 388 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 HSD17B8Q92506 261 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 CCSO14618 274 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 ZIC2O95409 532 aaPredicted RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 CTXN2P0C2S0 81 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 EIF1P41567 113 aaKnown RBP13.39□□□□□ -0.27
NUP98-203ENST00000359171 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
NUP98-203ENST00000359171 RHOUQ7L0Q8 258 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms