RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SOCS6O14544 535 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 YY2O15391 372 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 CTRB1P17538 263 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 RNLSQ5VYX0 342 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 CTRB2Q6GPI1 263 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF485Q8NCK3 441 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 IRF7Q92985 503 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SMIM19Q96E16 107 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 HSFX1Q9UBD0 423 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 KLF8O95600 359 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SDHAP31040 664 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ALKBH1Q13686 389 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF724A8MTY0 619 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SLC7A9P82251 487 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 FOXK2Q01167 660 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR13C8Q8NGS7 320 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 LHFPL5Q8TAF8 219 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SLC41A2Q96JW4 573 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR5K4A6NMS3 321 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SYNGR4O95473 234 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 NQO2P16083 231 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 UBXN2BQ14CS0 331 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SHEQ5VZ18 495 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 BCDIN3DQ7Z5W3 292 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 GPR137CQ8N3F9 429 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR5L2Q8NGL0 311 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR6C68A6NDL8 312 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF728P0DKX0 622 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SLC35D3Q5M8T2 416 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 PAPOLGQ9BWT3 736 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 Q9Y3F1 56 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 CHST2Q9Y4C5 530 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 BLACEA4D250 179 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 FBLP22087 321 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 DUSP1P28562 367 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 NSDHLQ15738 373 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 HAGHQ16775 308 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 LY6G5CQ5SRR4 150 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 TMPPEQ6ZT21 453 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 PRR18Q8N4B5 295 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ATF6BQ99941 703 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR51I2Q9H344 312 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 LILRB3O75022 631 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 DDAH2O95865 285 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SPP1P10451 314 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ARRB2P32121 409 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 EPHA4P54764 986 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SERTAD2Q14140 314 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 RAET1LQ5VY80 246 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ETFRF1Q6IPR1 90 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 GLCCI1Q86VQ1 547 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 NAXDQ8IW45 347 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 RELL2Q8NC24 303 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 TSLPQ969D9 159 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 PHYHIPLQ96FC7 376 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 TECTBQ96PL2 329 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 HRASLSQ9HDD0 168 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 GJB5O95377 273 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 FABP5Q01469 135 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 CAMK2BQ13554 666 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 HABP2Q14520 560 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 DPY19L2P2Q6ZN68 376 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 BAP18Q8IXM2 172 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 RNF175Q8N4F7 328 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR8D4Q8NGM9 314 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 AKR1E2Q96JD6 320 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 CMSS1Q9BQ75 279 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 WDR83Q9BRX9 315 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 SPTBN2O15020 2390 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 CEBPZOSA8MTT3 80 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 K7ERQ8 282 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF93P35789 620 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 EMP3P54852 163 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 RAG2P55895 527 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 HNF4GQ14541 408 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 GCNT2Q8N0V5 402 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 BPIFCQ8NFQ6 507 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 GNPNAT1Q96EK6 184 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 ACER3Q9NUN7 267 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 SOX4Q06945 474 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 FAHD1Q6P587 224 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 DOCK1Q14185 1865 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR6C76A6NM76 312 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PHOX2AO14813 284 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF354AO60765 605 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 LCATP04180 440 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 MTHFD2P13995 350 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 CPMP14384 443 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms