RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SCLYQ96I15 445 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 NXF2Q9GZY0 626 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF443Q9Y2A4 671 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FXYD1O00168 92 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SELEP16581 610 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 RPS25P62851 125 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 RPS26P62854 115 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SLC35G1Q2M3R5 365 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 TEX30Q5JUR7 227 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FAM69BQ5VUD6 431 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MAVSQ7Z434 540 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CMTM8Q8IZV2 173 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MFSD4AQ8N468 514 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 BRI3BPQ8WY22 251 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 GPR78Q96P69 363 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CMC2Q9NRP2 79 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 WRAP73Q9P2S5 460 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CSO75390 466 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FUT1P19526 365 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CD96P40200 585 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 HNRNPKP61978 463 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MOGAT2Q3SYC2 334 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SPRYD7Q5W111 196 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 DOK3Q7L591 496 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FBXL6Q8N531 539 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FOXJ1Q92949 421 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 DDOQ99489 341 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 EGLN3Q9H6Z9 239 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF160Q9HCG1 818 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 RTCAO00442 366 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ENPP3O14638 875 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 USP2O75604 605 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MRPL3P09001 348 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 AADACP22760 399 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 HAGHQ16775 308 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 P4HA3Q7Z4N8 544 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 EXD3Q8N9H8 876 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 C10orf35Q96D05 121 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 A0A1B0GVG6 124 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PSMD9O00233 223 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CTXN1P60606 82 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 DHODHQ02127 395 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PTPRFP10586 1907 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 A0A0A6YYJ9 748 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 BRINP1O60477 761 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CST4P01036 141 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PDGFBP01127 241 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SSTR2P30874 369 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SLC25A1P53007 311 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 UBE2G2P60604 165 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FOXK2Q01167 660 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM65Q6PI78 240 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PLXDC2Q6UX71 529 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LYG2Q86SG7 212 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GALNT10Q86SR1 603 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FGF14Q92915 247 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 HLA-CQ95604 372 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PRR11Q96HE9 360 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 WWTR1Q9GZV5 400 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 K7ERU9 68 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GSTZ1O43708 216 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SLC35E2P0CK97 266 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 COX5AP20674 150 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 MSX1P28360 303 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GPR4P46093 362 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PPP1R8Q12972 351 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GFOD2Q3B7J2 385 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR4N5Q8IXE1 308 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR5AP2Q8NGF4 316 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ST7LQ8TDW4 575 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 POT1Q9NUX5 634 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LINC01387J3KSC0 135 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 MAN2B1O00754 1011 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ST8SIA5O15466 376 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 EIF4E2O60573 245 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GPR75O95800 540 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF44P15621 663 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SRP9P49458 86 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 KIAA1024LP59773 190 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 EXOSC2Q13868 293 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CPNE8Q86YQ8 564 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR4K13Q8NH42 304 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ENKD1Q9H0I2 346 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF331Q9NQX6 463 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM265A0A087WTH1 108 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LINC00862A6NCI5 91 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 HIST1H3AP68431 136 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FCRLAQ7L513 359 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LRRC3BQ96PB8 259 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR7D2Q96RA2 312 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM204Q9BSN7 226 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 WNK3Q9BYP7 1800 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 A0A0D9SEW6 157 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SOWAHBA6NEL2 793 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SAP18O00422 153 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 KNG1P01042 644 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms