RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SLC2A1P11166 492 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 DEFA4P12838 97 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 RPA2P15927 270 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 TEAD1P28347 426 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 HBG1P69891 147 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 HBG2P69892 147 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SLC10A1Q14973 349 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 GLYATL3Q5SZD4 288 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 METTL17Q9H7H0 456 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A6P0DMU7 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A5P0DMU8 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A7P0DMV0 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A8P0DMV1 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A9P0DMV2 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A2Q5DJT8 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A1Q5HYN5 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 ENTHD1Q8IYW4 607 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 OR5AS1Q8N127 324 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CT45A3Q8NHU0 189 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 C11orf40Q8WZ69 217 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 Q96M85 177 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CSF3RQ99062 836 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 ZDHHC5Q9C0B5 715 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SGCEO43556 437 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SRPXP78539 464 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SLC35D3Q5M8T2 416 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 LAX1Q8IWV1 398 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 PLPP7Q8NBV4 271 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 OR52I1Q8NGK6 324 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 TIMD4Q96H15 378 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SEC22AQ96IW7 307 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SAMD10Q9BYL1 202 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 PHF1O43189 567 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 CSO75390 466 aaKnown RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 NDUFB7P17568 137 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 EPHA5P54756 1037 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 RPL27P61353 136 aaKnown RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 FXNQ16595 210 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 NAXDQ8IW45 347 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 LILRA2Q8N149 483 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 INTS12Q96CB8 462 aaKnown RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SEMA4CQ9C0C4 833 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 C7orf72A4D263 438 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 NAGAP17050 411 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SLC35A4Q96G79 324 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 MENTQ9BUN1 341 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 UBQLN3Q9H347 655 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SNX11Q9Y5W9 270 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 A0A0B4J2A0 478 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 ZNF74Q16587 644 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 GLIPR1L1Q6UWM5 242 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 NAA50Q9GZZ1 169 aaKnown RBP16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SHPKQ9UHJ6 478 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 GPR55Q9Y2T6 319 aaPredicted RBP16.56■□□□□ 0.24
COL18A1-202ENST00000355480 PMP2P02689 132 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 PSMB1P20618 241 aaKnown RBP16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SERPINF1P36955 418 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 RPL35P42766 123 aaKnown RBP16.56■□□□□ 0.24
COL18A1-202ENST00000355480 KIR2DL3P43628 341 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 BATFQ16520 125 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 KCNIP4Q6PIL6 250 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 NKAIN3Q8N8D7 197 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 EMC6Q9BV81 110 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SUCNR1Q9BXA5 334 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 CHRNA9Q9UGM1 479 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 RAB27BO00194 218 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 DEGS1O15121 323 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 HABP2Q14520 560 aaPredicted RBP16.56■□□□□ 0.24
COL18A1-202ENST00000355480 PRTGQ2VWP7 1150 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 AARDQ4LEZ3 155 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 SLC43A2Q8N370 569 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 OR1N1Q8NGS0 311 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 FAM3DQ96BQ1 224 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 TUBG2Q9NRH3 451 aa16.56■□□□□ 0.24
COL18A1-202ENST00000355480 PAPLNO95428 1278 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 SRFP11831 508 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 AGFG1P52594 562 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 VWA2Q5GFL6 755 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 CHST8Q9H2A9 424 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 DUSP22Q9NRW4 184 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 M0R082 166 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 FADS1O60427 444 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 CLEC3BP05452 202 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 ANXA7P20073 488 aaKnown RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 GSK3AP49840 483 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 TMPRSS7Q7RTY8 843 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 SEMA6DQ8NFY4 1073 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 RHOXF1Q8NHV9 184 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 HSD17B6O14756 317 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 ADGRE4PQ86SQ3 457 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 SMAP2Q8WU79 429 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-202ENST00000355480 C8orf44Q96CB5 159 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 RNF170Q96K19 258 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 FBXL2Q9UKC9 423 aa16.55■□□□□ 0.24
COL18A1-202ENST00000355480 HRH3Q9Y5N1 445 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms