RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TSFMP43897 325 aaKnown RBP16.22■□□□□ 0.19
APP-202ENST00000348990 PRKXP51817 358 aa16.22■□□□□ 0.19
APP-202ENST00000348990 SCRN3Q0VDG4 424 aa16.22■□□□□ 0.19
APP-202ENST00000348990 OR10K2Q6IF99 312 aa16.22■□□□□ 0.19
APP-202ENST00000348990 ZCCHC12Q6PEW1 402 aa16.22■□□□□ 0.19
APP-202ENST00000348990 PUSL1Q8N0Z8 303 aaKnown RBP16.22■□□□□ 0.19
APP-202ENST00000348990 KXD1Q9BQD3 176 aa16.22■□□□□ 0.19
APP-202ENST00000348990 FANCFQ9NPI8 374 aa16.22■□□□□ 0.19
APP-202ENST00000348990 EDARQ9UNE0 448 aa16.22■□□□□ 0.19
APP-202ENST00000348990 SWI5Q1ZZU3 235 aa16.22■□□□□ 0.19
APP-202ENST00000348990 ENPP7Q6UWV6 458 aa16.22■□□□□ 0.19
APP-202ENST00000348990 JAGN1Q8N5M9 183 aa16.22■□□□□ 0.19
APP-202ENST00000348990 LILRB1Q8NHL6 650 aaPredicted RBP16.22■□□□□ 0.19
APP-202ENST00000348990 PPP1R1CQ8WVI7 109 aa16.22■□□□□ 0.19
APP-202ENST00000348990 ZBTB8AQ96BR9 441 aa16.22■□□□□ 0.19
APP-202ENST00000348990 FARS2O95363 451 aaKnown RBP16.21■□□□□ 0.19
APP-202ENST00000348990 APEHP13798 732 aaKnown RBP16.21■□□□□ 0.19
APP-202ENST00000348990 TM4SF4P48230 202 aa16.21■□□□□ 0.19
APP-202ENST00000348990 FAM53BQ14153 422 aa16.21■□□□□ 0.19
APP-202ENST00000348990 CEBPEQ15744 281 aa16.21■□□□□ 0.19
APP-202ENST00000348990 FBXO42Q6P3S6 717 aa16.21■□□□□ 0.19
APP-202ENST00000348990 TMEM71Q6P5X7 295 aa16.21■□□□□ 0.19
APP-202ENST00000348990 BPIFB2Q8N4F0 458 aa16.21■□□□□ 0.19
APP-202ENST00000348990 CHST4Q8NCG5 386 aa16.21■□□□□ 0.19
APP-202ENST00000348990 CMKLR1Q99788 373 aa16.21■□□□□ 0.19
APP-202ENST00000348990 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
APP-202ENST00000348990 TRAV14DV4A0A0A6YYC5 116 aa16.21■□□□□ 0.19
APP-202ENST00000348990 FITM1A5D6W6 292 aa16.21■□□□□ 0.19
APP-202ENST00000348990 CTSVO60911 334 aa16.21■□□□□ 0.19
APP-202ENST00000348990 PMS2P2O95744 297 aa16.21■□□□□ 0.19
APP-202ENST00000348990 GPR75O95800 540 aa16.21■□□□□ 0.19
APP-202ENST00000348990 ZNF806P0C7X5 589 aa16.21■□□□□ 0.19
APP-202ENST00000348990 GPR143P51810 404 aa16.21■□□□□ 0.19
APP-202ENST00000348990 ITPRIPL2Q3MIP1 535 aa16.21■□□□□ 0.19
APP-202ENST00000348990 PABPC1L2AQ5JQF8 200 aa16.21■□□□□ 0.19
APP-202ENST00000348990 RAB11FIP2Q7L804 512 aa16.21■□□□□ 0.19
APP-202ENST00000348990 ZNF761Q86XN6 746 aaPredicted RBP16.21■□□□□ 0.19
APP-202ENST00000348990 CCDC3Q9BQI4 270 aa16.21■□□□□ 0.19
APP-202ENST00000348990 MFRPQ9BY79 579 aa16.21■□□□□ 0.19
APP-202ENST00000348990 ICAM5Q9UMF0 924 aa16.21■□□□□ 0.19
APP-202ENST00000348990 LRRK1Q38SD2 2015 aa16.21■□□□□ 0.19
APP-202ENST00000348990 OR2W5A6NFC9 320 aa16.21■□□□□ 0.18
APP-202ENST00000348990 GLAP06280 429 aa16.21■□□□□ 0.18
APP-202ENST00000348990 ATP1B3P54709 279 aa16.21■□□□□ 0.18
APP-202ENST00000348990 ZNF425Q6IV72 752 aa16.21■□□□□ 0.18
APP-202ENST00000348990 ANKRD16Q6P6B7 361 aa16.21■□□□□ 0.18
APP-202ENST00000348990 ABHD13Q7L211 337 aa16.21■□□□□ 0.18
APP-202ENST00000348990 GALNT16Q8N428 558 aa16.21■□□□□ 0.18
APP-202ENST00000348990 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.18
APP-202ENST00000348990 TRIM43Q96BQ3 446 aaPredicted RBP16.21■□□□□ 0.18
APP-202ENST00000348990 ELF4Q99607 663 aaPredicted RBP16.21■□□□□ 0.18
APP-202ENST00000348990 CMSS1Q9BQ75 279 aaKnown RBP16.21■□□□□ 0.18
APP-202ENST00000348990 GRHPRQ9UBQ7 328 aa16.21■□□□□ 0.18
APP-202ENST00000348990 SLC22A7Q9Y694 548 aa16.21■□□□□ 0.18
APP-202ENST00000348990 TBC1D3DA0A087WVF3 549 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D3IA0A087WXS9 549 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D3LB9A6J9 549 aa16.2■□□□□ 0.18
APP-202ENST00000348990 GP1BAP07359 652 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D3HP0C7X1 549 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ACTR1BP42025 376 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ACAA2P42765 397 aaKnown RBP16.2■□□□□ 0.18
APP-202ENST00000348990 ACTBP60709 375 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ACTR1AP61163 376 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ACTG1P63261 375 aa16.2■□□□□ 0.18
APP-202ENST00000348990 PLAURQ03405 335 aa16.2■□□□□ 0.18
APP-202ENST00000348990 CDNFQ49AH0 187 aa16.2■□□□□ 0.18
APP-202ENST00000348990 NKAIN2Q5VXU1 208 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D3CQ6IPX1 549 aa16.2■□□□□ 0.18
APP-202ENST00000348990 H3F3CQ6NXT2 135 aa16.2■□□□□ 0.18
APP-202ENST00000348990 C3orf33Q6P1S2 294 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D3Q8IZP1 549 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 EIF4E3Q8N5X7 224 aaKnown RBP16.2■□□□□ 0.18
APP-202ENST00000348990 OR4S1Q8NGB4 309 aa16.2■□□□□ 0.18
APP-202ENST00000348990 OR2G2Q8NGZ5 317 aa16.2■□□□□ 0.18
APP-202ENST00000348990 PPP1R14AQ96A00 147 aa16.2■□□□□ 0.18
APP-202ENST00000348990 RAB7BQ96AH8 199 aa16.2■□□□□ 0.18
APP-202ENST00000348990 PIGMQ9H3S5 423 aa16.2■□□□□ 0.18
APP-202ENST00000348990 WDR76Q9H967 626 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 DNAJB12Q9NXW2 375 aaKnown RBP16.2■□□□□ 0.18
APP-202ENST00000348990 ZNF736B4DX44 427 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 SRPX2O60687 465 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 OR6A2O95222 327 aa16.2■□□□□ 0.18
APP-202ENST00000348990 CSF2RAP15509 400 aa16.2■□□□□ 0.18
APP-202ENST00000348990 AKR1C4P17516 323 aa16.2■□□□□ 0.18
APP-202ENST00000348990 SERTAD2Q14140 314 aa16.2■□□□□ 0.18
APP-202ENST00000348990 PAN3Q58A45 887 aaKnown RBP16.2■□□□□ 0.18
APP-202ENST00000348990 ZNF550Q7Z398 422 aa16.2■□□□□ 0.18
APP-202ENST00000348990 RBM18Q96H35 190 aaKnown RBP16.2■□□□□ 0.18
APP-202ENST00000348990 OR2S2Q9NQN1 319 aa16.2■□□□□ 0.18
APP-202ENST00000348990 TBC1D29Q9UFV1 150 aa16.2■□□□□ 0.18
APP-202ENST00000348990 CGGBP1Q9UFW8 167 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 SLC22A13Q9Y226 551 aa16.2■□□□□ 0.18
APP-202ENST00000348990 DNAH14Q0VDD8 3507 aa16.2■□□□□ 0.18
APP-202ENST00000348990 NUP210Q8TEM1 1887 aaPredicted RBP16.2■□□□□ 0.18
APP-202ENST00000348990 DCTN6O00399 190 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ALOX12BO75342 701 aa16.2■□□□□ 0.18
APP-202ENST00000348990 ZNF254O75437 659 aa16.2■□□□□ 0.18
APP-202ENST00000348990 EML2O95834 649 aa16.2■□□□□ 0.18
APP-202ENST00000348990 CEACAM5P06731 702 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms