RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GP6Q9HCN6 339 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 SRA1Q9HD15 236 aaKnown RBP16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 FOXD3Q9UJU5 478 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 TRGV8A0A0C4DH27 118 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 CCDC182A6NF36 153 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 RENP00797 406 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 IGHV3-9P01782 118 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 CTLA4P16410 223 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 SPI1P17947 270 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 TIMP3P35625 211 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 CA7P43166 264 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC25A1P53007 311 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 NUDT6P53370 316 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 CLRN1P58418 232 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 PMPCAQ10713 525 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 MED21Q13503 144 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 OCLNQ16625 522 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 TSPO2Q5TGU0 170 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 VWA1Q6PCB0 445 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 LRFN4Q6PJG9 635 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 B3GLCTQ6Y288 498 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 FAM214BQ7L5A3 538 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 OR51V1Q9H2C8 321 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 GLRX2Q9NS18 164 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 GLTPQ9NZD2 209 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 PRSS50Q9UI38 385 aa16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 INTS1Q8N201 2190 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-201ENST00000347519 M0R3G1 203 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 AKAP8O43823 692 aaKnown RBP16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC43A1O75387 559 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 MRPL33O75394 65 aaKnown RBP16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 TNFSF13O75888 250 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 GPANK1O95872 356 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 TMIGD3P0DMS9 266 aaPredicted RBP16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 CSNK1A1P48729 337 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC25A30Q5SVS4 291 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 OR2A2Q6IF42 318 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 CNEP1R1Q8N9A8 125 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 MCHR2Q969V1 340 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF837Q96EG3 531 aaPredicted RBP16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 FOXN4Q96NZ1 517 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 DMRTA2Q96SC8 542 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 RERGLQ9H628 205 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 AMBNQ9NP70 447 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC7A10Q9NS82 523 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 B9D1Q9UPM9 204 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 POLEQ07864 2286 aa16.79■□□□□ 0.28
CHMP4A-201ENST00000347519 IGLV1-36A0A0B4J1U3 117 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 B8ZZF3 427 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 MPZL2O60487 215 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC16A7O60669 478 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 QDPRP09417 244 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 UQCRFS1P47985 274 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 FOXG1P55316 489 aaPredicted RBP16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 PER3P56645 1201 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 APOFQ13790 326 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 KLHL12Q53G59 568 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 C6orf141Q5SZD1 244 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 NXNL2Q5VZ03 156 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 OTPQ5XKR4 325 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 KRT80Q6KB66 452 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 LYPD4Q6UWN0 246 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 HDDC2Q7Z4H3 204 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 BTLAQ7Z6A9 289 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 OR6N1Q8NGY5 312 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 NSMAFQ92636 917 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 KISS1RQ969F8 398 aaPredicted RBP16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 RHNO1Q9BSD3 238 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 CLN6Q9NWW5 311 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 LRCH1Q9Y2L9 728 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 CFAP46Q8IYW2 2715 aa16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 HELZ2Q9BYK8 2649 aaKnown RBP16.78■□□□□ 0.28
CHMP4A-201ENST00000347519 A0A0G2JNJ9 132 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 CENPBD1B2RD01 187 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 AHCYL1O43865 530 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 XPNPEP2O43895 674 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 SMNDC1O75940 238 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 IL2RAP01589 272 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 STSP08842 583 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 PAICSP22234 425 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 GNLYP22749 145 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 OR3A2P47893 321 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF133P52736 654 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 LINC01590Q5TEZ4 76 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 UGT2A3Q6UWM9 527 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 ZBTB46Q86UZ6 589 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 APH1AQ96BI3 265 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 STARD4Q96DR4 205 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 ALKBH3Q96Q83 286 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 RBP7Q96R05 134 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 SLCO5A1Q9H2Y9 848 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 PARPBPQ9NWS1 579 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 Q9UFV3 132 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 MEMO1Q9Y316 297 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 EMC9Q9Y3B6 208 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 FKBP7Q9Y680 259 aa16.77■□□□□ 0.28
CHMP4A-201ENST00000347519 RP1L1Q8IWN7 2480 aaPredicted RBP16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 E9PLN8 166 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 PRODHO43272 600 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms